RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 CCDC116Q8IYX3 515 aa12.57□□□□□ -0.4
PCDHB5-201ENST00000231134 CCDC107Q8WV48 283 aa12.57□□□□□ -0.4
PCDHB5-201ENST00000231134 NECAB3Q96P71 396 aaPredicted RBP12.57□□□□□ -0.4
PCDHB5-201ENST00000231134 METTL1Q9UBP6 276 aaKnown RBP12.57□□□□□ -0.4
PCDHB5-201ENST00000231134 WASF3Q9UPY6 502 aa12.57□□□□□ -0.4
PCDHB5-201ENST00000231134 CARHSP1Q9Y2V2 147 aaKnown RBP12.57□□□□□ -0.4
PCDHB5-201ENST00000231134 DOCK4Q8N1I0 1966 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 A0A087WV48 116 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 PPM1DO15297 605 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 ZNF208O43345 1280 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 PPP1R3DO95685 299 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 MPC1LP0DKB6 136 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 TPT1P13693 172 aaKnown RBP12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 SERPINA4P29622 427 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 ID4P47928 161 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 C9orf64Q5T6V5 341 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 DMKNQ6E0U4 476 aaPredicted RBP12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 GDF6Q6KF10 455 aaPredicted RBP12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 PWWP2BQ6NUJ5 590 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 ZNF585AQ6P3V2 769 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 UNQ6494/PRO21346Q6UXR6 183 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 TGIF2LXQ8IUE1 241 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 AVL9Q8NBF6 648 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 OR13C2Q8NGS9 318 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 PFN4Q8NHR9 129 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 CD300LFQ8TDQ1 290 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 CAMK1GQ96NX5 476 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 GPR62Q9BZJ7 368 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 TNFSF18Q9UNG2 199 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 FEZF1A0PJY2 475 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 GXYLT2A0PJZ3 443 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 SLC31A2O15432 143 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 FBXO24O75426 580 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 AP1S1P61966 158 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 SIRPAP78324 504 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 TGM3Q08188 693 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 IL10RAQ13651 578 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 ACTBL2Q562R1 376 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 PAPD4Q6PIY7 484 aaKnown RBP12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 ZNF836Q6ZNA1 936 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 DNAJA3Q96EY1 480 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 PELI1Q96FA3 418 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 IP6K3Q96PC2 410 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 A0A087X0M5 115 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 TRAV1-2A0A0B4J238 106 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 A0A1B0GX30 115 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 RNF222A6NCQ9 220 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 UNC119BA6NIH7 251 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 RNASEK-C17orf49H0YIS7 233 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 M0QZQ0 153 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 PJVKQ0ZLH3 352 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 RSU1Q15404 277 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 LY6G6FQ5SQ64 297 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 PLEKHS1Q5SXH7 462 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 RSPO2Q6UXX9 243 aaPredicted RBP12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 OR4K13Q8NH42 304 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 COL26A1Q96A83 441 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 MARS2Q96GW9 593 aaKnown RBP12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 KATNBL1Q9H079 304 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 RGCCQ9H4X1 137 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 USP36Q9P275 1121 aaKnown RBP12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 GTF2A1LQ9UNN4 478 aa12.56□□□□□ -0.4
PCDHB5-201ENST00000231134 MED6O75586 246 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 STC2O76061 302 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 IFNA2P01563 188 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 CKMP06732 381 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 AKAIN1P0CW23 69 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 RAB6AP20340 208 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 RAB5CP51148 216 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 CEBPGP53567 150 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 LTBQ06643 244 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 ILF3Q12906 894 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 GAREM2Q75VX8 874 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 ZNF627Q7L945 461 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 CD163Q86VB7 1156 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 TRAPPC5Q8IUR0 188 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 CCDC54Q8NEL0 328 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 SECTM1Q8WVN6 248 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 ZBTB8AQ96BR9 441 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 ELF4Q99607 663 aaPredicted RBP12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 PLEKHA1Q9HB21 404 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 AHSPQ9NZD4 102 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 CLEC4EQ9ULY5 219 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 C17orf113A0A1B0GUU1 675 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 RAB3DO95716 219 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 PCP4P48539 62 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 INPP5JQ15735 1006 aaPredicted RBP12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 AMZ1Q400G9 498 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 THSD4Q6ZMP0 1018 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 GDF7Q7Z4P5 450 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 BAP18Q8IXM2 172 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 C15orf54Q8N8G6 183 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 TGM7Q96PF1 710 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 EFCAB11Q9BUY7 163 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 ADARB2Q9NS39 739 aaKnown RBP12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 SIRT3Q9NTG7 399 aaPredicted RBP12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 PPP4R1LQ9P1A2 415 aa12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 RCC2Q9P258 522 aaKnown RBP12.55□□□□□ -0.4
PCDHB5-201ENST00000231134 B4GALT6Q9UBX8 382 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms