RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PDCD5O14737 125 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 SCO1O75880 301 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 MT-ND4P03905 459 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 ZNF19P17023 458 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 STXBP1P61764 594 aaKnown RBP18.8■□□□□ 0.6
SNX3-201ENST00000230085 HHEXQ03014 270 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 ZNF267Q14586 743 aaPredicted RBP18.8■□□□□ 0.6
SNX3-201ENST00000230085 NR0B2Q15466 257 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 ZNF425Q6IV72 752 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 FAM199XQ6PEV8 388 aaPredicted RBP18.8■□□□□ 0.6
SNX3-201ENST00000230085 ZNF619Q8N2I2 560 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 SLC16A11Q8NCK7 471 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 OR4D9Q8NGE8 314 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 OR5J2Q8NH18 312 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 NSMAFQ92636 917 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 MRPL48Q96GC5 212 aaKnown RBP18.8■□□□□ 0.6
SNX3-201ENST00000230085 ZFP3Q96NJ6 502 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 SDF2Q99470 211 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 ZNF426Q9BUY5 554 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 RBCK1Q9BYM8 510 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 ENKD1Q9H0I2 346 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 SLC6A20Q9NP91 592 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 MRPS30Q9NP92 439 aaKnown RBP18.8■□□□□ 0.6
SNX3-201ENST00000230085 BRD7Q9NPI1 651 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 POLE3Q9NRF9 147 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 RDH8Q9NYR8 311 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 KLHL9Q9P2J3 617 aa18.8■□□□□ 0.6
SNX3-201ENST00000230085 CDV3Q9UKY7 258 aaKnown RBP18.8■□□□□ 0.6
SNX3-201ENST00000230085 COL5A1P20908 1838 aaPredicted RBP18.79■□□□□ 0.6
SNX3-201ENST00000230085 A0A1B0GVC2 190 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 A6NIN4 97 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 RGS11O94810 467 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 WDPCPO95876 746 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 AK1P00568 194 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 IFNGP01579 166 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 IFNA16P05015 189 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 RAB40ALP0C0E4 278 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 NAT1P18440 290 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 SSTR2P30874 369 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 RBM34P42696 430 aaKnown RBP18.79■□□□□ 0.6
SNX3-201ENST00000230085 GDI2P50395 445 aaKnown RBP18.79■□□□□ 0.6
SNX3-201ENST00000230085 SCAND1P57086 179 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 CRYZQ08257 329 aaKnown RBP18.79■□□□□ 0.6
SNX3-201ENST00000230085 IL10RAQ13651 578 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 OR1Q1Q15612 314 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 RSPO4Q2I0M5 234 aaPredicted RBP18.79■□□□□ 0.6
SNX3-201ENST00000230085 PXDC1Q5TGL8 231 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 GUSBP11Q6P575 273 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 ZCCHC12Q6PEW1 402 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 THSD4Q6ZMP0 1018 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 LRRC25Q8N386 305 aaPredicted RBP18.79■□□□□ 0.6
SNX3-201ENST00000230085 RAB40AQ8WXH6 277 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 BPIFA2Q96DR5 249 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 TBX5Q99593 518 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 NRTNQ99748 197 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 KLHL1Q9NR64 748 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 LRIT1Q9P2V4 623 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 MED31Q9Y3C7 131 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 SESN1Q9Y6P5 492 aa18.79■□□□□ 0.6
SNX3-201ENST00000230085 ANKRD20A5PA0PJZ0 165 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 ZC3H12DA2A288 527 aaKnown RBP18.78■□□□□ 0.6
SNX3-201ENST00000230085 CPED1A4D0V7 1026 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 AIPO00170 330 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 TFP02787 698 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 PRG2P13727 222 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 MAPK3P27361 379 aaPredicted RBP18.78■□□□□ 0.6
SNX3-201ENST00000230085 CERS1P27544 350 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 PYCR1P32322 319 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 FASLGP48023 281 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 TSPAN5P62079 268 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 UBE2IP63279 158 aaKnown RBP18.78■□□□□ 0.6
SNX3-201ENST00000230085 AMZ1Q400G9 498 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 ZNF626Q68DY1 528 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 TFAP2EQ6VUC0 442 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 ZNF761Q86XN6 746 aaPredicted RBP18.78■□□□□ 0.6
SNX3-201ENST00000230085 CMTM4Q8IZR5 234 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 OR7G2Q8NG99 324 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 ZFPM2Q8WW38 1151 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 CDS1Q92903 461 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 GAL3ST3Q96A11 431 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 PELI1Q96FA3 418 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 C20orf141Q9NUB4 165 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 SDHAF2Q9NX18 166 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 HCN3Q9P1Z3 774 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 KRT33AO76009 404 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 CALCBP10092 127 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 GLB1P16278 677 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 SIRPAP78324 504 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 FAM111BQ6SJ93 734 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 LGALS14Q8TCE9 139 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 SFXN2Q96NB2 322 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 FERD3LQ96RJ6 166 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 STACQ99469 402 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 DDOQ99489 341 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 CDC6Q99741 560 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 GPN1Q9HCN4 374 aaPredicted RBP18.78■□□□□ 0.6
SNX3-201ENST00000230085 EQTNQ9NQ60 294 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 DUSP22Q9NRW4 184 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 MGAT4CQ9UBM8 478 aa18.78■□□□□ 0.6
SNX3-201ENST00000230085 CNOT1A5YKK6 2376 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms