RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ELAVL3Q14576 367 aaKnown RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM41BQ5BJD5 291 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 GPR139Q6DWJ6 353 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 FBXO46Q6PJ61 603 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 FIGLAQ6QHK4 219 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM99Q8N816 258 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 SLC2A12Q8TD20 617 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 TMED6Q8WW62 240 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 LMF2Q9BU23 707 aaKnown RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 CPEB1Q9BZB8 566 aaKnown RBP12.79□□□□□ -0.36
HCFC2-201ENST00000229330 A0A1B0GUL6 1792 aa12.79□□□□□ -0.36
HCFC2-201ENST00000229330 OR5H14A6NHG9 310 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 A6NIZ1 184 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 CTSAP10619 480 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 CD80P33681 288 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 OR10A3P58181 314 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 RAP1BP61224 184 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 RAP1AP62834 184 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 GBX1Q14549 363 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 SLC22A6Q4U2R8 563 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 NIPAL3Q6P499 406 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 KIAA0907Q7Z7F0 614 aaPredicted RBP12.78□□□□□ -0.36
HCFC2-201ENST00000229330 OR2AK2Q8NG84 335 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 TBC1D20Q96BZ9 403 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 SLC6A17Q9H1V8 727 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 A0A1B0GTL3 188 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 A8MXE2 369 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 LATO43561 262 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 SLC16A7O60669 478 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 LGI1O95970 557 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 SOD1P00441 154 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 MAKP20794 623 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 BMPR1AP36894 532 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 OR2B8PP59922 312 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 OR13C9Q8NGT0 318 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 TAAR8Q969N4 342 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 RNF32Q9H0A6 362 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 SFXN1Q9H9B4 322 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM269A0A1B0GVZ9 245 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 HIDE1A8MVS5 230 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 HSBP1L1C9JCN9 74 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 OR13C7P0DN81 318 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 HLA-FP30511 346 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 UBE2MP61081 183 aaKnown RBP12.78□□□□□ -0.36
HCFC2-201ENST00000229330 HTD2P86397 168 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 AVL9Q8NBF6 648 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 FGF20Q9NP95 211 aaPredicted RBP12.78□□□□□ -0.36
HCFC2-201ENST00000229330 TAS2R5Q9NYW4 299 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 MMP2P08253 660 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 SOX18P35713 384 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 RPS21P63220 83 aaKnown RBP12.78□□□□□ -0.36
HCFC2-201ENST00000229330 Q6ZTK2 550 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 TTC9Q92623 222 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 TANKQ92844 425 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 TEAD3Q99594 435 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 PDCD1LG2Q9BQ51 273 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 PLAC1Q9HBJ0 212 aa12.78□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM189-UBE2V1I3L0A0 370 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF593O00488 134 aaPredicted RBP12.77□□□□□ -0.36
HCFC2-201ENST00000229330 CYTIPO60759 359 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 TIMP1P01033 207 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 SBK2P0C263 348 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 ACHEP22303 614 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 SNU13P55769 128 aaKnown RBP12.77□□□□□ -0.36
HCFC2-201ENST00000229330 TLE4Q04727 773 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 FXNQ16595 210 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 ESPNLQ6ZVH7 1005 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 CALHM3Q86XJ0 350 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 ISG20Q96AZ6 181 aaKnown RBP12.77□□□□□ -0.36
HCFC2-201ENST00000229330 PDXPQ96GD0 296 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 TRMT2BQ96GJ1 504 aaKnown RBP12.77□□□□□ -0.36
HCFC2-201ENST00000229330 ZDHHC12Q96GR4 267 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 SCN7AQ01118 1682 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 NPIPA2E9PIF3 369 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 NPIPA3F8WFD2 350 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 C1QAP02745 245 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 PRR35P0CG20 571 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 HOXC12P31275 282 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 COL9A2Q14055 689 aaPredicted RBP12.77□□□□□ -0.36
HCFC2-201ENST00000229330 PDZD11Q5EBL8 140 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 CMTM4Q8IZR5 234 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 IL17RCQ8NAC3 791 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 TM4SF18Q96CE8 201 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 CASD1Q96PB1 797 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 CSAG2Q9Y5P2 127 aa12.77□□□□□ -0.36
HCFC2-201ENST00000229330 MEIKINA0A087WXM9 373 aa12.77□□□□□ -0.37
HCFC2-201ENST00000229330 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.37
HCFC2-201ENST00000229330 H3BQ06 376 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-201ENST00000229330 MAGEB4O15481 346 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-201ENST00000229330 ATG12O94817 140 aa12.77□□□□□ -0.37
HCFC2-201ENST00000229330 AIFM1O95831 613 aa12.77□□□□□ -0.37
HCFC2-201ENST00000229330 C1SP09871 688 aa12.77□□□□□ -0.37
HCFC2-201ENST00000229330 CST5P28325 142 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-201ENST00000229330 CDK3Q00526 305 aa12.77□□□□□ -0.37
HCFC2-201ENST00000229330 UQCC3Q6UW78 93 aa12.77□□□□□ -0.37
HCFC2-201ENST00000229330 NLGN4YQ8NFZ3 816 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-201ENST00000229330 FBXW5Q969U6 566 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms