RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 FAM53BQ14153 422 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 FZD2Q14332 565 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 HACD4Q5VWC8 232 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 KCTD18Q6PI47 426 aaPredicted RBP13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 TMED4Q7Z7H5 227 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 RFLNBQ8N5W9 214 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 OR4D9Q8NGE8 314 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 TSLPQ969D9 159 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 MARVELD1Q9BSK0 173 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 PDCD10Q9BUL8 212 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 TRAV18A0A075B6X5 111 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 NPIPA5E9PKD4 350 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 UQCRC1P31930 480 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 GAS1P54826 345 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 DUSP18Q8NEJ0 188 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 OR56B4Q8NH76 319 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 ORAI3Q9BRQ5 295 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 LRRC61Q9BV99 259 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 ATG5Q9H1Y0 275 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 NPIPA1Q9UND3 350 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 L7N2F9 121 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 M0R233 179 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 KLF4O43474 513 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 ADAM8P78325 824 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 KLHL24Q6TFL4 600 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 CMTM4Q8IZR5 234 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC43A2Q8N370 569 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 C3orf49Q96BT1 292 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 SCARF2Q96GP6 870 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 MYEF2Q9P2K5 600 aaKnown RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 ING1Q9UK53 422 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF346Q9UL40 294 aaKnown RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 FXYD6-FXYD2A0A087WZ82 144 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF217O75362 1048 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 TFP02787 698 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 AP2S1P53680 142 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 GMFBP60983 142 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 EFNB1P98172 346 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 PCGF3Q3KNV8 242 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 Q499Y3 187 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC35D3Q5M8T2 416 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 PCNPQ8WW12 178 aaKnown RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 LCORQ96JN0 433 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 FXYD6Q9H0Q3 95 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 ATXN7L1Q9ULK2 861 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 DHDHQ9UQ10 334 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 HELZP42694 1942 aaKnown RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 CREBL2O60519 120 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 VEGFCP49767 419 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 ALKBH1Q13686 389 aaKnown RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 DMKNQ6E0U4 476 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 TCTE3Q8IZS6 198 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 OR52I2Q8NH67 350 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 EXO5Q9H790 373 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 METTL17Q9H7H0 456 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 NTMQ9P121 344 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 MRPS17Q9Y2R5 130 aaKnown RBP13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 SESN1Q9Y6P5 492 aa13.67□□□□□ -0.22
UBE2D4-201ENST00000222402 IGKV1D-16P01601 117 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 SYPP08247 313 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 GIMD1P0DJR0 217 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 OR7E24Q6IFN5 339 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 LIN54Q6MZP7 749 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 SUN5Q8TC36 379 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 VSTM2LQ96N03 204 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 C7orf50Q9BRJ6 194 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 MCOLN1Q9GZU1 580 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 ELOVL3Q9HB03 270 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 EPHA6Q9UF33 1036 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 A0A1W2PPC4 97 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 FAM25EA8MYX2 175 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 DUX1O43812 170 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 PSMB1P20618 241 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 S1PR1P21453 382 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 ACAA2P42765 397 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 CAPZBP47756 277 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC6A8P48029 635 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 GFOD2Q3B7J2 385 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 YIF1BQ5BJH7 314 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 CBLN3Q6UW01 205 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 OVCH1Q7RTY7 1134 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 MARCH3Q86UD3 253 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 PM20D2Q8IYS1 436 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF417Q8TAU3 575 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 GTPBP2Q9BX10 602 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 SEC61A2Q9H9S3 476 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 KLRF1Q9NZS2 232 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 LOC100509620A0A075B734 347 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 BLACEA4D250 179 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 TLCD2A6NGC4 264 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 ACOT7O00154 380 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 IMPA2O14732 288 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF749O43361 778 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 PEX14O75381 377 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 RIDAP52758 137 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 UBE2IP63279 158 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 LTBQ06643 244 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 RPL18Q07020 188 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 SCGB2B2Q4G0G5 96 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms