RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 TCFL5Q9UL49 500 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 T-ENOLP0DO92 83 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 CD82P27701 267 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ELMOD2Q8IZ81 293 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 OR8J1Q8NGP2 316 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 OR5W2Q8NH69 310 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 PCNPQ8WW12 178 aaKnown RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 ZNF419Q96HQ0 510 aaPredicted RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 KATNB1Q9BVA0 655 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 HIF3AQ9Y2N7 669 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 GMEB1Q9Y692 573 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 A8MVM7 634 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ATP1B3P54709 279 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 C5orf46Q6UWT4 87 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 LINC00346Q8IVM7 164 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 GPR87Q9BY21 358 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 PCDH17O14917 1159 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ZNF12P17014 697 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 RAB11BQ15907 218 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 B3GNTL1Q67FW5 361 aaPredicted RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 GPR139Q6DWJ6 353 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 GRINAQ7Z429 371 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 SLC15A4Q8N697 577 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 SLC25A43Q8WUT9 341 aaPredicted RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 RND1Q92730 232 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 OR52D1Q9H346 318 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 PLEKHJ1Q9NW61 149 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 DCKP27707 260 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 S100A2P29034 98 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 APOBEC1P41238 236 aaKnown RBP12.63□□□□□ -0.39
SIX4-201ENST00000216513 ERVK-16P61578 105 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 EDDM3AQ14507 147 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 SLX4IPQ5VYV7 408 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 FCRLAQ7L513 359 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 UBTD2Q8WUN7 234 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 CEP290O15078 2479 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 ARID1BQ8NFD5 2236 aaPredicted RBP12.63□□□□□ -0.39
SIX4-201ENST00000216513 TCRBV5S1A1TA0A578 114 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 RPL34P49207 117 aaKnown RBP12.63□□□□□ -0.39
SIX4-201ENST00000216513 AKR1C2P52895 323 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 SEC61A1P61619 476 aaKnown RBP12.63□□□□□ -0.39
SIX4-201ENST00000216513 L3MBTL4Q8NA19 623 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 C16orf52Q8NHV5 167 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 CLMPQ9H6B4 373 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 RHBDD3Q9Y3P4 386 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 SERPINA5P05154 406 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 SERPINA2P20848 420 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 EIF2S3LQ2VIR3 472 aaKnown RBP12.63□□□□□ -0.39
SIX4-201ENST00000216513 CPZQ66K79 652 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 DPCDQ9BVM2 203 aaPredicted RBP12.63□□□□□ -0.39
SIX4-201ENST00000216513 TNFRSF19Q9NS68 423 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 CHRNA9Q9UGM1 479 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 NXPH2O95156 264 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 GSTT2P0CG29 244 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 MTNR1AP48039 350 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 PTH2RP49190 550 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 DUSP5Q16690 384 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 DMRTC1Q5HYR2 192 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 OR2A2Q6IF42 318 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 MAML2Q8IZL2 1156 aaPredicted RBP12.63□□□□□ -0.39
SIX4-201ENST00000216513 RFT1Q96AA3 541 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 LGALS12Q96DT0 336 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 WWTR1Q9GZV5 400 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 NLKQ9UBE8 527 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 HRH3Q9Y5N1 445 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 MOSPD3O75425 235 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 CBR3O75828 277 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 PODNL1Q6PEZ8 512 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 SPACA9Q96E40 222 aaPredicted RBP12.63□□□□□ -0.39
SIX4-201ENST00000216513 VN1R1Q9GZP7 353 aa12.63□□□□□ -0.39
SIX4-201ENST00000216513 OR6C65A6NJZ3 312 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 POLR2IP36954 125 aaKnown RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 MICAQ29983 383 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 FAM76BQ5HYJ3 339 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 OR4D6Q8NGJ1 314 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 ACOT11Q8WXI4 607 aaPredicted RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 LOXHD1Q8IVV2 1947 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 CNTRLQ7Z7A1 2325 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 NAA50Q9GZZ1 169 aaKnown RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 NT5DC2Q9H857 520 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 UBE2J1Q9Y385 318 aaPredicted RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 A0A1B0GWA3 101 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 ANXA3P12429 323 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 IL2RGP31785 369 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 CSRP2Q16527 193 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 TOMM40LQ969M1 308 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 OR2A14Q96R47 310 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 C1orf198Q9H425 327 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 SDR39U1Q9NRG7 319 aaPredicted RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 A0A1W2PQF6 199 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 RAB27BO00194 218 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 ZNF593O00488 134 aaPredicted RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 GOSR2O14653 212 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 OSMP13725 252 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 NFYBP25208 207 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 CXCR4P61073 352 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms