RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TMEM229AB2RXF0 380 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 ANGPT2O15123 496 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 NPIPB7O75200 414 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 LY6HO94772 140 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 LGI1O95970 557 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 NUDT7P0C024 238 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 ACTR3P61158 418 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 HOXC5Q00444 222 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 CHRNB3Q05901 458 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 KPNB1Q14974 876 aaKnown RBP13.09□□□□□ -0.31
UPK3A-201ENST00000216211 TMEM249Q2WGJ8 235 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 TBRG1Q3YBR2 411 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 ZNF311Q5JNZ3 666 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 LINGO2Q7L985 606 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 RETREG3Q86VR2 466 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 OR1K1Q8NGR3 316 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 FAM168AQ92567 244 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 SLC25A36Q96CQ1 311 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 ALKBH3Q96Q83 286 aaPredicted RBP13.09□□□□□ -0.31
UPK3A-201ENST00000216211 TNFRSF13CQ96RJ3 184 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 CDRT15Q96T59 188 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 HOPXQ9BPY8 73 aaPredicted RBP13.09□□□□□ -0.31
UPK3A-201ENST00000216211 PAIP1Q9H074 479 aaKnown RBP13.09□□□□□ -0.31
UPK3A-201ENST00000216211 CACYBPQ9HB71 228 aaKnown RBP13.09□□□□□ -0.31
UPK3A-201ENST00000216211 GID8Q9NWU2 228 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 THUMPD1Q9NXG2 353 aaKnown RBP13.09□□□□□ -0.31
UPK3A-201ENST00000216211 IFT52Q9Y366 437 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 PMF1-BGLAPU3KQ54 211 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 IGHV1-18A0A0C4DH31 117 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 ELOA3DA6NLF2 546 aaPredicted RBP13.08□□□□□ -0.32
UPK3A-201ENST00000216211 ZNF587BE7ETH6 402 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 ENTPD5O75356 428 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 UPK3AO75631 287 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 VAMP5O95183 116 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 NPPAP01160 153 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 SLC25A16P16260 332 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 EFNA4P52798 201 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 LOXL1Q08397 574 aaPredicted RBP13.08□□□□□ -0.32
UPK3A-201ENST00000216211 RGNQ15493 299 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 ZSWIM7Q19AV6 140 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 ELOA3BQ3SY89 546 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 C1QTNF12Q5T7M4 302 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 SLC2A7Q6PXP3 512 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 EPHX4Q8IUS5 362 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 KDM8Q8N371 416 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 ELOA3Q8NG57 546 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 SPATA3Q8NHX4 192 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 STK35Q8TDR2 534 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 C10orf105Q8TEF2 133 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 NANOS1Q8WY41 292 aaKnown RBP13.08□□□□□ -0.32
UPK3A-201ENST00000216211 GTF2H4Q92759 462 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 MAL2Q969L2 176 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 FBXO17Q96EF6 278 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 BOD1Q96IK1 185 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 SLC38A2Q96QD8 506 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 ARMC7Q9H6L4 198 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 LEF1Q9UJU2 399 aaPredicted RBP13.08□□□□□ -0.32
UPK3A-201ENST00000216211 RASD1Q9Y272 281 aa13.08□□□□□ -0.32
UPK3A-201ENST00000216211 A0A096LPI6 279 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 CLIC1O00299 241 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 PDE5AO76074 875 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 AHSA1O95433 338 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 PNMTP11086 282 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 BMP4P12644 408 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 RPS5P46782 204 aaKnown RBP13.07□□□□□ -0.32
UPK3A-201ENST00000216211 TUBA1BP68363 451 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 TUBA4AP68366 448 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 EGR4Q05215 589 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 SWI5Q1ZZU3 235 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 MST1LQ2TV78 715 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 CHRFAM7AQ494W8 412 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 SPATS1Q496A3 300 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 PODNL1Q6PEZ8 512 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 TUBA1AQ71U36 451 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 DPP10Q8N608 796 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 MFSD8Q8NHS3 518 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 KTI12Q96EK9 354 aaPredicted RBP13.07□□□□□ -0.32
UPK3A-201ENST00000216211 PTDSS2Q9BVG9 487 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 DCLRE1BQ9H816 532 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 RNPEPL1Q9HAU8 725 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 A4GALTQ9NPC4 353 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 OBP2BQ9NPH6 170 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 SEC14L4Q9UDX3 406 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 POMPQ9Y244 141 aa13.07□□□□□ -0.32
UPK3A-201ENST00000216211 FBN3Q75N90 2809 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 MALRD1Q5VYJ5 2156 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 A0A096LPE4 126 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 A0A1W2PPZ6 126 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 FTCDNL1E5RQL4 147 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 F12P00748 615 aaPredicted RBP13.06□□□□□ -0.32
UPK3A-201ENST00000216211 IFNA2P01563 188 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 HOXB9P17482 250 aaPredicted RBP13.06□□□□□ -0.32
UPK3A-201ENST00000216211 GTF2E2P29084 291 aaKnown RBP13.06□□□□□ -0.32
UPK3A-201ENST00000216211 CLDN17P56750 224 aa13.06□□□□□ -0.32
UPK3A-201ENST00000216211 UBE2NP61088 152 aaKnown RBP13.06□□□□□ -0.32
UPK3A-201ENST00000216211 VLDLRP98155 873 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms