RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 SORCS2Q96PQ0 1159 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 OR7D2Q96RA2 312 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 USB1Q9BQ65 265 aaKnown RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 SLC17A9Q9BYT1 436 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 ZNF724A8MTY0 619 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 HLA-HP01893 362 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 CD1EP15812 388 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 CLDN10P78369 228 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 BDH1Q02338 343 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 TAF9Q16594 264 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 SLC22A6Q4U2R8 563 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 FBXO46Q6PJ61 603 aaPredicted RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 SBSNQ6UWP8 590 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 Q6ZRG5 221 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 TMPRSS7Q7RTY8 843 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 FJX1Q86VR8 437 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 TCEAL8Q8IYN2 117 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 IL22RA1Q8N6P7 574 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 LHFPL5Q8TAF8 219 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 TEX37Q96LM6 180 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 OR2A14Q96R47 310 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 TM7SF3Q9NS93 570 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 SLC39A9Q9NUM3 307 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 HHLA2Q9UM44 414 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 LRP6O75581 1613 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 H0Y8G0 127 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 LILRB3O75022 631 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 LY86O95711 162 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 NFYBP25208 207 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 TAS2R46P59540 309 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 RPS18P62269 152 aaKnown RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 HBA1P69905 142 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 CAMK2DQ13557 499 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 RHOUQ7L0Q8 258 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 CBARPQ8N350 705 aaPredicted RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 SFT2D1Q8WV19 159 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 ZNF75AQ96N20 296 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 LINC00052Q96N35 136 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 CDCA4Q9BXL8 241 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 BCO1Q9HAY6 547 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 ETV7Q9Y603 341 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 PIAS3Q9Y6X2 628 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 LRP5LA4QPB2 252 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 A6NCN8 305 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 OR5H14A6NHG9 310 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 ARGFXA6NJG6 315 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 VSTM2BA6NLU5 285 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 RGS11O94810 467 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 SEMA4FO95754 770 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 PIPP12273 146 aaPredicted RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 ZNF250P15622 560 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 HOXA11P31270 313 aaPredicted RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 FASLGP48023 281 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 FOXK1P85037 733 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 MAMDC2Q7Z304 686 aaPredicted RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 RABEPKQ7Z6M1 372 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 APCDD1Q8J025 514 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 OR5D14Q8NGL3 314 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 OR6T1Q8NGN1 323 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 OR52N1Q8NH53 320 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 UPRTQ96BW1 309 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 NPFFR2Q9Y5X5 522 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 THBS1P07996 1170 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 HOXB9P17482 250 aaPredicted RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 THBS2P35442 1172 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 MALLQ13021 153 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 ZNF266Q14584 549 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 SYPL1Q16563 259 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 CDONQ4KMG0 1287 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 FIGLAQ6QHK4 219 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 UQCC3Q6UW78 93 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 RTL10Q7L3V2 364 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 RDH10Q8IZV5 341 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 MFSD4AQ8N468 514 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 FTCDNL1E5RQL4 147 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 J3QR89 54 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 CPEP16870 476 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 HTR1FP30939 366 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 RNF175Q8N4F7 328 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 SCMH1Q96GD3 660 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 UBXN10Q96LJ8 280 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 KATNB1Q9BVA0 655 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 MIOXQ9UGB7 285 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 ENTPD2Q9Y5L3 495 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 PTGESO14684 152 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 HMGN2P05204 90 aaKnown RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 TACR3P29371 465 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 MC3RP41968 323 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 C1orf61Q13536 156 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 VRK2Q86Y07 508 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 MCATQ8IVS2 390 aaKnown RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 NECAP1Q8NC96 275 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 SGK3Q96BR1 496 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 SLC41A2Q96JW4 573 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 OR1F2PQ96R84 312 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 ANTXRLA6NF34 631 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 GJE1A6NN92 205 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 OR8G3PP0DMU2 310 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 TACR1P25103 407 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms