RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 ELMOD3Q96FG2 381 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 OR1F2PQ96R84 312 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 CA10Q9NS85 328 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 ELF5Q9UKW6 265 aaPredicted RBP13.79□□□□□ -0.2
EFNB1-201ENST00000204961 CDV3Q9UKY7 258 aaKnown RBP13.79□□□□□ -0.2
EFNB1-201ENST00000204961 A0A0B4J2E0 115 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 A0A1B0GX12 115 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 DCDC2BA2VCK2 349 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 GPR171O14626 319 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 NAT2P11245 290 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 ACAA2P42765 397 aaKnown RBP13.79□□□□□ -0.2
EFNB1-201ENST00000204961 ZBTB37Q5TC79 503 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 OR4D10Q8NGI6 311 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 NSMAFQ92636 917 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 TSLPQ969D9 159 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 CREB3L1Q96BA8 519 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 KCNJ15Q99712 375 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 NIPAL2Q9H841 368 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 PRTFDC1Q9NRG1 225 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 DNAJB12Q9NXW2 375 aaKnown RBP13.79□□□□□ -0.2
EFNB1-201ENST00000204961 SLCO1C1Q9NYB5 712 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 TAS2R10Q9NYW0 307 aa13.79□□□□□ -0.2
EFNB1-201ENST00000204961 FARSAQ9Y285 508 aaKnown RBP13.79□□□□□ -0.2
EFNB1-201ENST00000204961 ANXA2P2A6NMY6 339 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 C2orf74A8MZ97 194 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 ANXA2P07355 339 aaKnown RBP13.78□□□□□ -0.2
EFNB1-201ENST00000204961 THEGLP0DJG4 465 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 CCKBRP32239 447 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 CTHP32929 405 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 GRK6P43250 576 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 LBX1P52954 281 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 BTN1A1Q13410 526 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 CDK5R1Q15078 307 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 LIN54Q6MZP7 749 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 MED25Q71SY5 747 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 AMELYQ99218 206 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 SOSTQ9BQB4 213 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 RDH8Q9NYR8 311 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 TMEM184BQ9Y519 407 aaPredicted RBP13.78□□□□□ -0.2
EFNB1-201ENST00000204961 HEBP2Q9Y5Z4 205 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 PLPP2O43688 288 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 HNRNPA2B1P22626 353 aaKnown RBP13.78□□□□□ -0.2
EFNB1-201ENST00000204961 CDK2P24941 298 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 NRG3P56975 720 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 EXOSC2Q13868 293 aaKnown RBP13.78□□□□□ -0.2
EFNB1-201ENST00000204961 LGALSLQ3ZCW2 172 aaPredicted RBP13.78□□□□□ -0.2
EFNB1-201ENST00000204961 MCATQ8IVS2 390 aaKnown RBP13.78□□□□□ -0.2
EFNB1-201ENST00000204961 C20orf85Q9H1P6 137 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 ZFP64Q9NPA5 681 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 GDE1Q9NZC3 331 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 SCML1Q9UN30 329 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 C2orf16Q68DN1 1984 aa13.78□□□□□ -0.2
EFNB1-201ENST00000204961 CXorf51AA0A1B0GTR3 108 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 ATP6V1G2-DDX39BF2Z307 99 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 EFNB2P52799 333 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 ZP2Q05996 745 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 BIKQ13323 160 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 TNK1Q13470 666 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 MRGPREQ86SM8 312 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 PM20D2Q8IYS1 436 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 KTI12Q96EK9 354 aaPredicted RBP13.77□□□□□ -0.2
EFNB1-201ENST00000204961 GTPBP2Q9BX10 602 aaKnown RBP13.77□□□□□ -0.2
EFNB1-201ENST00000204961 Q9N2J8 555 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 FBXL3Q9UKT7 428 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 PTPRSQ13332 1948 aa13.77□□□□□ -0.2
EFNB1-201ENST00000204961 PTH2RP49190 550 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 PER3P56645 1201 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 GRK1Q15835 563 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 NKPD1Q17RQ9 610 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 LINC00303Q3SY05 128 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 DMKNQ6E0U4 476 aaPredicted RBP13.77□□□□□ -0.21
EFNB1-201ENST00000204961 C17orf107Q6ZR85 190 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 ZNF627Q7L945 461 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 GPALPP1Q8IXQ4 340 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 SLC22A18ASQ8N1D0 253 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 FAM46BQ96A09 425 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 TMEM106AQ96A25 262 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 OR11A1Q9GZK7 315 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 ST6GALNAC2Q9UJ37 374 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 TRAV8-7A0A075B6U6 113 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 TRAV18A0A075B6X5 111 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 FAM25EA8MYX2 175 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 KCNAB3O43448 404 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 CTNSO60931 367 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 MPZL1O95297 269 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 SPARCP09486 303 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 RBMS1P29558 406 aaKnown RBP13.77□□□□□ -0.21
EFNB1-201ENST00000204961 KIR2DS3Q14952 304 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 OR7E24Q6IFN5 339 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 TEX261Q6UWH6 196 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 IDO2Q6ZQW0 420 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 OR56B4Q8NH76 319 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 TOE1Q96GM8 510 aaKnown RBP13.77□□□□□ -0.21
EFNB1-201ENST00000204961 MS4A7Q9GZW8 240 aaPredicted RBP13.77□□□□□ -0.21
EFNB1-201ENST00000204961 NOX3Q9HBY0 568 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 RXFP3Q9NSD7 469 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 LAMP5Q9UJQ1 280 aa13.77□□□□□ -0.21
EFNB1-201ENST00000204961 U3KQ87 197 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms