RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ALG5Q9Y673 324 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 POM121CA8CG34 1229 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 TLX3O43711 291 aaPredicted RBP11.06□□□□□ -0.64
CHPF2-201ENST00000035307 FZD7O75084 574 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 UCHL1P09936 223 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 SLC2A1P11166 492 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ANXA3P12429 323 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 HLA-DMAP28067 261 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 PRKAR1BP31321 381 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 CLRN1P58418 232 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ACTA2P62736 377 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ACTG2P63267 376 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 E2F1Q01094 437 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 SSX1Q16384 188 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 PCGF3Q3KNV8 242 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ZAR1Q86SH2 424 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 OR4C3Q8NH37 302 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 NXPE2Q96DL1 559 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 MSANTD3Q96H12 275 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 OR5B2Q96R09 309 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 EMC6Q9BV81 110 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 LHX9Q9NQ69 397 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 CENPVL1A0A0U1RR11 272 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 C4orf47A7E2U8 309 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 M0R296 226 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 MRPS14O60783 128 aaKnown RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 FPR3P25089 353 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 LCN1P31025 176 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 AKR1D1P51857 326 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 AGAP7PQ5VUJ5 663 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 NXNL2Q5VZ03 156 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 SLC25A24Q6NUK1 477 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 KCTD18Q6PI47 426 aaPredicted RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 DGAT2L6Q6ZPD8 337 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 OR8D4Q8NGM9 314 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 SYNPRQ8TBG9 265 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 SNAPC3Q92966 411 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 NAT6Q93015 286 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 NEURL2Q9BR09 285 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 CDCP1Q9H5V8 836 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 OCIAD1Q9NX40 245 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 SPEGQ15772 3267 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 TRANK1O15050 2925 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 A0A1B0GVI7 797 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 SERINC4A6NH21 518 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 C17orf51A8MQB3 221 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 CDC42EP2O14613 210 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 SULT1C4O75897 302 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 KCNK2O95069 426 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 GZMMP51124 257 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 EIF2B1Q14232 305 aaKnown RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 GLYR1Q49A26 553 aaPredicted RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 CDNFQ49AH0 187 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 SFXN4Q6P4A7 337 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 MAMDC2Q7Z304 686 aaPredicted RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 GALNT11Q8NCW6 608 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 DNAJA4Q8WW22 397 aaPredicted RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 GPA33Q99795 319 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 C19orf43Q9BQ61 176 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 PITHD1Q9GZP4 211 aaPredicted RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 ELOVL3Q9HB03 270 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 CACNA1AO00555 2505 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 CTNSO60931 367 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 RIDAP52758 137 aaKnown RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 ART1P52961 327 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 SNRPGP62308 76 aaKnown RBP11.05□□□□□ -0.64
CHPF2-201ENST00000035307 NOXA1Q86UR1 476 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 FAM26EQ8N5C1 309 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 OR13C3Q8NGS6 347 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 TMEM106AQ96A25 262 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 ARL6Q9H0F7 186 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 OR2S2Q9NQN1 319 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 UBQLN4Q9NRR5 601 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 PLSCR3Q9NRY6 295 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 CACNG2Q9Y698 323 aa11.05□□□□□ -0.64
CHPF2-201ENST00000035307 IGF2RP11717 2491 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 TMEM265A0A087WTH1 108 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 F5H5K5 113 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF264O43296 627 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 SCGB1D2O95969 90 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 HTR1FP30939 366 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 PSPHP78330 225 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 PWWP2BQ6NUJ5 590 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 OR5D18Q8NGL1 313 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 TSPAN10Q9H1Z9 355 aaPredicted RBP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 PCDHGA3Q9Y5H0 932 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 M0R233 179 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 ARPC5O15511 151 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 GCM2O75603 506 aaPredicted RBP11.04□□□□□ -0.64
CHPF2-201ENST00000035307 SBK2P0C263 348 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 ELK1P19419 428 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 SLC2A5P22732 501 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 NUDT1P36639 197 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 IFITM3Q01628 133 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 CD163Q86VB7 1156 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 ALDH16A1Q8IZ83 802 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 CDCA4Q9BXL8 241 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 STRADBQ9C0K7 418 aa11.04□□□□□ -0.64
CHPF2-201ENST00000035307 AKIRIN1Q9H9L7 192 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms