RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 LEG1Q6P5S2 330 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 TMPRSS12Q86WS5 348 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 FRMD1Q8N878 549 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 POMGNT2Q8NAT1 580 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 OR51A4Q8NGJ6 313 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 TAS2R5Q9NYW4 299 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 DENND4AQ7Z401 1863 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 MFSD2BA6NFX1 497 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 ANXA2P2A6NMY6 339 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 PRAF2O60831 178 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 RDH16O75452 317 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 NAT1P18440 290 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 C5AR1P21730 350 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 AQP2P41181 271 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 EFNB2P52799 333 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 ART1P52961 327 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 ADPRHP54922 357 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 RUNX3Q13761 415 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 RGS7BPQ6MZT1 257 aaPredicted RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 NUDT18Q6ZVK8 323 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 KCTD20Q7Z5Y7 419 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 C10orf53Q8N6V4 93 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 DVL3Q92997 716 aaPredicted RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 ANKRD9Q96BM1 317 aaPredicted RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 STACQ99469 402 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 CHST6Q9GZX3 395 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 ARL6Q9H0F7 186 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 TCF7L1Q9HCS4 588 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 MPDZO75970 2070 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 ATP6V1G2-DDX39BF2Z307 99 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 DCTN6O00399 190 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 GMFGO60234 142 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 OR10H2O60403 315 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 GALR3O60755 368 aaPredicted RBP12.81□□□□□ -0.36
USH1C-201ENST00000005226 ZNF35P13682 527 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 NUP62P37198 522 aaPredicted RBP12.81□□□□□ -0.36
USH1C-201ENST00000005226 PCGF3Q3KNV8 242 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 ZNF626Q68DY1 528 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 RNF44Q7L0R7 432 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 OR4C3Q8NH37 302 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 ST8SIA4Q92187 359 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 LCORQ96JN0 433 aaPredicted RBP12.81□□□□□ -0.36
USH1C-201ENST00000005226 ADAD1Q96M93 576 aaKnown RBP12.81□□□□□ -0.36
USH1C-201ENST00000005226 FOXN4Q96NZ1 517 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 ALG12Q9BV10 488 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 TRIM2Q9C040 744 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 FRRS1LQ9P0K9 344 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 MOKQ9UQ07 419 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 TICRRQ7Z2Z1 1910 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 PDCD5O14737 125 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 NDUFB6O95139 128 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 F13BP05160 661 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 AP3S2P59780 193 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 GPR18Q14330 331 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 ELFN2Q5R3F8 820 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 LIPNQ5VXI9 398 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 TMUB2Q71RG4 321 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 ABHD13Q7L211 337 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 DND1Q8IYX4 353 aaKnown RBP12.81□□□□□ -0.36
USH1C-201ENST00000005226 OR8S1Q8NH09 359 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 STK35Q8TDR2 534 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 ARPC5LQ9BPX5 153 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 LMAN2LQ9H0V9 348 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 PPA2Q9H2U2 334 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 CERS4Q9HA82 394 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 MKKSQ9NPJ1 570 aaPredicted RBP12.81□□□□□ -0.36
USH1C-201ENST00000005226 C14orf105Q9NVL8 296 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 ACTR10Q9NZ32 417 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 FBXL2Q9UKC9 423 aa12.81□□□□□ -0.36
USH1C-201ENST00000005226 A0A087WV62 115 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 GOSR2O14653 212 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 PPM1BO75688 479 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 NKX2-2O95096 273 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 IGF2P01344 180 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 GIPP09681 153 aaPredicted RBP12.8□□□□□ -0.36
USH1C-201ENST00000005226 SEC61A1P61619 476 aaKnown RBP12.8□□□□□ -0.36
USH1C-201ENST00000005226 TFF2Q03403 129 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 LGALS3BPQ08380 585 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 GGTLC2Q14390 218 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 LINC01590Q5TEZ4 76 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 ULK3Q6PHR2 472 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 LINC00114Q6XXX2 140 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 CFAP77Q6ZQR2 320 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 CA13Q8N1Q1 262 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 SPICQ8N5J4 248 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 RELL2Q8NC24 303 aaPredicted RBP12.8□□□□□ -0.36
USH1C-201ENST00000005226 CAMKVQ8NCB2 501 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 RCBTB1Q8NDN9 531 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 OR9A4Q8NGU2 314 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 HAVCR1Q96D42 359 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 LMF1Q96S06 567 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 AKAP7Q9P0M2 348 aaPredicted RBP12.8□□□□□ -0.36
USH1C-201ENST00000005226 MRM2Q9UI43 246 aaKnown RBP12.8□□□□□ -0.36
USH1C-201ENST00000005226 KIF25Q9UIL4 384 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 NAP1L6A6NFF2 107 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 ZNF749O43361 778 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 KDM4BO94953 1096 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 ARHGDIBP52566 201 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms