RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Trim2Q9ESN6 744 aaKnown RBP9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Raet1dQ9JI58 249 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Fgf21Q9JJN1 210 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Xlr4bQ9JJQ7 215 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Arpc3Q9JM76 178 aaKnown RBP9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Stub1Q9WUD1 304 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Vwa8Q8CC88 1905 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr1156A2AVC3 323 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Rnf39A2RT81 352 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gm13178B1AVU7 408 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Aldh3b2E9Q3E1 479 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gm8882E9Q7E4 283 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Vmn2r51L7N215 852 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cfl1P18760 166 aaKnown RBP9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Mmp12P34960 473 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Capza2P47754 286 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 PitpnbP53811 271 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Serpinf1P97298 417 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 HbegfQ06186 208 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Fam219bQ14DQ1 197 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Tfb2mQ3TL26 396 aaKnown RBP9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gal3st4Q3V1B8 480 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ptpn18Q61152 453 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ssr4Q62186 172 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 NovQ64299 354 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Slc22a20Q80UJ1 556 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ttc29Q80VM3 471 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Eif1axQ8BMJ3 144 aaKnown RBP9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 4921517D22RikQ8CET0 269 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Slc1a7Q8JZR4 559 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Tmem45bQ8VCZ2 278 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Plpp7Q91WB2 271 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Eps8l3Q91WL0 600 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 OgfrQ99PG2 633 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cldnd1Q9CQX5 253 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Prl8a6Q9DAY2 240 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Slco2a1Q9EPT5 643 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Copz2Q9JHH9 205 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ndrg2Q9QYG0 371 aaKnown RBP9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Uchl1Q9R0P9 223 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Omt2aF6ZJR3 104 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 RaxO35602 342 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Irs3O54718 495 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Tmco2P0C1V4 183 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ifi204P0DOV2 619 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Arf3P61205 181 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Csf2raQ00941 388 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Slc35a1Q61420 336 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cd53Q61451 219 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Znf436Q8BPP0 452 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Mrpl38Q8K2M0 380 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Oas3Q8VI93 1138 aaKnown RBP9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Otud1Q9CUB6 454 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cdca4Q9CWM2 237 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ndrg3Q9QYF9 375 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Six6Q9QZ28 246 aa9□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ajm1A2AJA9 974 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Tmem235B1AQL3 211 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Btbd2E9PUS2 523 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Tmem200cJ3QK46 637 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Fcgr3P08508 261 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ube2mP61082 183 aaKnown RBP8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Actc1P68033 377 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Acta1P68134 377 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 VegfcP97953 415 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Nxpe2Q3U095 558 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Lin54Q571G4 749 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Xkr7Q5GH64 580 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 PfplQ5RKV8 702 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 CelQ64285 599 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Npr2Q6VVW5 1047 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Otop1Q80VM9 600 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Mgat4aQ812G0 535 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gpr1Q8K087 353 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Aspscr1Q8VBT9 550 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr539Q8VGL9 319 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Pex13Q9D0K1 405 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Lhx9Q9WUH2 397 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cacna1eQ61290 2272 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gm7714E9Q079 131 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gm6882J3KMT3 313 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Entpd2O55026 495 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 March9Q3TZ87 348 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gm10662Q3UT86 313 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 TifaQ793I8 184 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Fbxw17Q8CFE8 466 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 GnalQ8CGK7 381 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Mmp28Q8CGV8 520 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ctxn1Q8K129 82 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 V1ra11Q8R2E6 318 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Abhd17cQ8VCV1 320 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Asb16Q8VHS5 453 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Vmn1r45Q8VIC7 318 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Mrgprb3Q91ZC1 312 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Mrgpra7Q91ZC5 305 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Lpcat2bQ9D5U0 516 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Brix1Q9DCA5 353 aaKnown RBP8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cyp11a1Q9QZ82 526 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Dctn6Q9WUB4 190 aa8.99□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Pmm2Q9Z2M7 242 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms