RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Trbc1A0A0A6YWV4 173 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr1223A0A1L1SU13 311 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 A0A286YCH8 300 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 3110040M04RikA0A286YDK0 300 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 A0A286YE43 300 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Scgb2b3D2XZ38 112 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Zfp707F6QUN2 391 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr889L7N1Y6 314 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rasd1O35626 280 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Nkx2-6P43688 289 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 DhpsQ3TXU5 369 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 CalcrQ60755 533 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 CltbQ6IRU5 229 aaKnown RBP11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Alg8Q6P8H8 526 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Slc6a7Q6PGE7 637 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Tha1Q6XPS7 400 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Klhl13Q80TF4 654 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 PigtQ8BXQ2 582 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Fgd2Q8BY35 655 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Tmem221Q8K071 230 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr998Q8VF76 314 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr531Q8VGL2 304 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Slc19a3Q99PL8 488 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Copz2Q9JHH9 205 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Alyref2Q9JJW6 218 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gstz1Q9WVL0 216 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Col4a4Q9QZR9 1682 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 I0C0044D17RikA6PWL3 169 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Foxd2O35392 492 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rps4xP62702 263 aaKnown RBP11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Mtf1Q07243 675 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Acvr1bQ61271 505 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Cd55Q61475 390 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Zc3h12dQ8BIY3 533 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Cadm2Q8BLQ9 435 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Mettl2Q8BMK1 389 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Ccm2lQ8VCC6 481 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr582Q8VGV9 319 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Pskh1Q91YA2 424 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Nsa2Q9CR47 260 aaKnown RBP11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Ethe1Q9DCM0 254 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Actr10Q9QZB7 417 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Adamdec1Q9R0X2 467 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Phf3B2RQG2 2025 aaKnown RBP11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 2010106E10RikA2ANY3 279 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr1193A2AV13 318 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm266A6H634 200 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Adap1E9PY16 374 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 NlkO54949 527 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Emc8O70378 207 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Il9P15247 144 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rps11P62281 158 aaKnown RBP11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Crtc2Q3U182 692 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Klhl21Q3U410 597 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Hectd3Q3U487 861 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm10750Q3V0I0 133 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Nr0b1Q61066 472 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Fzd7Q61090 572 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Cpeb4Q7TN98 729 aaKnown RBP11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Doc2aQ7TNF0 405 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Tmbim1Q8BJZ3 309 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Peli1Q8C669 418 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Mettl21eQ8CDZ2 244 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 PiguQ8K358 434 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr54Q8VFE6 313 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr768Q8VGC4 312 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 CrebzfQ91ZR3 358 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Zmynd19Q9CQG3 227 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 B3gat1Q9CW73 334 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 B4galt2Q9Z2Y2 369 aa11.65□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Arhgap21Q6DFV3 1944 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Olfr1432A0A140LHS7 346 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Olfr288E9Q1P2 318 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 PdgfbP31240 241 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 TtkP35761 856 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 CapzbP47757 277 aaKnown RBP11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ccr4P51680 360 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Cdk10Q3UMM4 360 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 NnatQ61979 81 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Npepl1Q6NSR8 524 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Clba1Q8BHN9 321 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Acaa2Q8BWT1 397 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Akr7a2Q8CG76 367 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Rfwd3Q8CIK8 774 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Defb36Q8K3U4 67 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Q9D4G1 230 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Cers4Q9D6J1 393 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ca13Q9D6N1 262 aa11.65□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Wdr25E9Q349 535 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gm11397F6V5V4 377 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gm11168J3QN50 228 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gm17026K7N6Z0 213 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Cyp4a10O88833 509 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 DhfrP00375 187 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Slc12a3P59158 1002 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Cdk5r1P61809 307 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gnb5P62881 395 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 S100gP97816 79 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Pydc3Q3V3Q4 588 aa11.64□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Drd1Q61616 446 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms