RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Nat2P50295 290 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Aqp8P56404 261 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Arf3P61205 181 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 4930480E11RikQ0VG34 394 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 1700012B07RikQ3V0S8 276 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr843Q7TRG4 313 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr304Q7TS03 333 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Lrrc39Q8BGI7 337 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Zfp101Q8BP18 612 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Cldn17Q8BXA6 224 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Cst11Q9D269 139 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Dcbld1Q9D4J3 503 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Med11Q9D8C6 117 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 FastkQ9JIX9 511 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Dock4P59764 1978 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Wdr90Q6ZPG2 1874 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr1107A2AVB8 312 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr610E9Q598 315 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm8220F6YKI2 213 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 CcnkO88874 554 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 IapP24822 559 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Ppp1caP62137 330 aaKnown RBP15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Ankrd53Q3V0J4 497 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr332Q5NC45 344 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 EdnraQ61614 427 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Slc34a3Q80SU6 601 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Crls1Q80ZM8 303 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Clba1Q8BHN9 321 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Gper1Q8BMP4 375 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr1261Q8VFB0 306 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr514Q8VFZ6 310 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Clec2fQ8VI21 196 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Wdr45Q91VM3 360 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Gid4Q9CPY6 217 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 4933436I01RikQ9D3T1 429 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Dock11A2AF47 2073 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 RttnQ8R4Y8 2226 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Lrrc72A0A1Y7VMI0 288 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Rnf217D3YYI7 515 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Tmed7D3YZZ5 224 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 5430403G16RikD3Z5L4 667 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Zfp994J3QM38 661 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Tspan6O70401 245 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Klk1P15947 261 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 PlgP20918 812 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Cd28P31041 218 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Oprd1P32300 372 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Mtmr11Q3V1L6 700 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Grhl3Q5FWH3 603 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Mettl6Q8BVH9 282 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Cpne1Q8C166 536 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 4921517D22RikQ8CET0 269 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Dnajc22Q8CHS2 339 aa15.11■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm9008E9PVG0 424 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Mfsd4b5E9PYY6 479 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Fbxw28E9Q8A4 466 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Ms4a7E9Q9V5 267 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Vmn1r11Q3SXA2 299 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Nhlrc4Q3UP44 136 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Sntb2Q61235 520 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Rnf26Q8BUH7 424 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Defb22Q8BVC1 179 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 C1qtnf7Q8BVD7 289 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 RergQ8R367 199 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Tmem5Q8VDX6 444 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Park7Q99LX0 189 aaKnown RBP15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Fam122cQ9D5J5 180 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Brix1Q9DCA5 353 aaKnown RBP15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Izumo1rQ9EQF4 244 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Abcb10Q9JI39 715 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Tnfsf14Q9QYH9 239 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Uchl1Q9R0P9 223 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Gstz1Q9WVL0 216 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm364A2AFI6 671 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm14418A2ARR6 358 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm14322A2AW66 358 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Chrna10B2RX82 447 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Adamtsl5D3Z689 485 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 5430401F13RikE9Q328 175 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm20518E9Q548 580 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Zfp707F6QUN2 391 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Slc38a6G3UVW3 457 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 CfpP11680 464 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Atf7ip2Q3UL97 452 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 CltbQ6IRU5 229 aaKnown RBP15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Frg2f1Q6P3A2 227 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Tas2r40Q7TQB8 319 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 AasdhQ80WC9 1100 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Q8BHG2 160 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Nsun3Q8CCT7 348 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr769Q8K501 312 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr672Q8VG28 312 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Decr2Q9WV68 292 aa15.1■□□□□ 0.01
Shh-201ENSMUST00000002708 Rai1Q61818 1889 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm29797A0A140LIA7 188 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr1314A2AVL6 312 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Fcer1aP20489 250 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 RetP35546 1115 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Rps15P62843 145 aaKnown RBP15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Dlx5P70396 289 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms