RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NDEL1Q9GZM8 345 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 VCX3AQ9NNX9 186 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF71Q9NQZ8 489 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 CMC2Q9NRP2 79 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 PLA2G3Q9NZ20 509 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 CNOT2Q9NZN8 540 aaKnown RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 LRFN1Q9P244 771 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 DKKL1Q9UK85 242 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 IER3IP1Q9Y5U9 82 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 ITPR2Q14571 2701 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 A6NL46 340 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 SNTNA6NMZ2 147 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 RIIAD1A6NNX1 92 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 PRODHO43272 600 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 OR2T1O43869 369 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 CBR3O75828 277 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 WDPCPO95876 746 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 IFNGP01579 166 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 STSP08842 583 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 TFPIP10646 304 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 PIPP12273 146 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-221ENST00000641573 PEPDP12955 493 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 CNR1P21554 472 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 ADH6P28332 368 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 NOS3P29474 1203 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 GRPRP30550 384 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 UQCRC1P31930 480 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 MAP2K4P45985 399 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 SLC15A1P46059 708 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF91Q05481 1191 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 TMEM44Q2T9K0 475 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 ALG10Q5BKT4 473 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 AADACL4Q5VUY2 407 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 SPINK14Q6IE38 97 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 CXXC5Q7LFL8 322 aaKnown RBP11.81□□□□□ -0.52
PHGDH-221ENST00000641573 CPOQ8IVL8 374 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 GTPBP8Q8N3Z3 284 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-221ENST00000641573 STX19Q8N4C7 294 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 SVOPQ8N4V2 548 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 RELTQ969Z4 430 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 TMIGD2Q96BF3 282 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 SIGLEC11Q96RL6 698 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 GPX7Q96SL4 187 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-221ENST00000641573 POTEKPQ9BYX7 375 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 FN3KQ9H479 309 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 NRIP3Q9NQ35 241 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 HINT3Q9NQE9 182 aaKnown RBP11.81□□□□□ -0.52
PHGDH-221ENST00000641573 SLC6A5Q9Y345 797 aa11.81□□□□□ -0.52
PHGDH-221ENST00000641573 SPIN1Q9Y657 262 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-221ENST00000641573 SMIM31A0A1B0GVY4 71 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF891A8MT65 544 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-221ENST00000641573 FTCDNL1E5RQL4 147 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 NEURL1O76050 574 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 FADS2O95864 444 aaKnown RBP11.8□□□□□ -0.52
PHGDH-221ENST00000641573 CD14P08571 375 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 TSPAN19P0C672 248 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 DBTP11182 482 aaKnown RBP11.8□□□□□ -0.52
PHGDH-221ENST00000641573 PCMT1P22061 227 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 IDUAP35475 653 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 CTXN1P60606 82 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ERVK-25P63136 954 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 EMX1Q04741 257 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-221ENST00000641573 RPL18Q07020 188 aaKnown RBP11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ST3GAL4Q11206 333 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 CDC20Q12834 499 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 SELENBP1Q13228 472 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ITGADQ13349 1161 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 PMS2P3Q13401 168 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 OR1C1Q15619 314 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.8□□□□□ -0.525e-8■■■□□ 19.2
PHGDH-221ENST00000641573 ZNF362Q5T0B9 420 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-221ENST00000641573 AGAP7PQ5VUJ5 663 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 NXNL2Q5VZ03 156 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 SLC6A19Q695T7 634 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 XAF1Q6GPH4 301 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 PLBD1Q6P4A8 553 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 BBS1Q8NFJ9 593 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 OR5J2Q8NH18 312 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 MFSD8Q8NHS3 518 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 RFKQ969G6 155 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 OTULINQ96BN8 352 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 AGAP4Q96P64 663 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 SIGLEC12Q96PQ1 595 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 KATNB1Q9BVA0 655 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 TAPBPLQ9BX59 468 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ASPNQ9BXN1 380 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 FAM192AQ9GZU8 254 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 KLHL1Q9NR64 748 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 DEPPQ9NTK1 212 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 NDUFA13Q9P0J0 144 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 H2AFY2Q9P0M6 372 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-221ENST00000641573 KLHL21Q9UJP4 597 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 POLHQ9Y253 713 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 RPH3AQ9Y2J0 694 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ADAM18Q9Y3Q7 739 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 PCDHGB1Q9Y5G3 927 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ABCA12Q86UK0 2595 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 ICE1Q9Y2F5 2266 aa11.8□□□□□ -0.52
PHGDH-221ENST00000641573 PINLYPA6NC86 204 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms