RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 NDEL1Q9GZM8 345 aa16.45■□□□□ 0.22
PHGDH-209ENST00000641074 LSM2Q9Y333 95 aaKnown RBP16.45■□□□□ 0.22
PHGDH-209ENST00000641074 IMPA2O14732 288 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 SERPINI2O75830 405 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 TXNDC12O95881 172 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 GSTT1P30711 240 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 SDHAP31040 664 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 LIPAP38571 399 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 CD96P40200 585 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 DSCR4P56555 118 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-209ENST00000641074 MED22Q15528 200 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 OR7A5Q15622 319 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 GHDCQ8N2G8 530 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 LSM14AQ8ND56 463 aaKnown RBP16.44■□□□□ 0.22
PHGDH-209ENST00000641074 OR9Q1Q8NGQ5 310 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 ZPLD1Q8TCW7 415 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 TSPAN32Q96QS1 320 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 UBL7Q96S82 380 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-209ENST00000641074 MRPL39Q9NYK5 338 aaKnown RBP16.44■□□□□ 0.22
PHGDH-209ENST00000641074 LRFN1Q9P244 771 aa16.44■□□□□ 0.22
PHGDH-209ENST00000641074 RPH3AQ9Y2J0 694 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-209ENST00000641074 OR6C68A6NDL8 312 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 SLC22A31A6NKX4 558 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 C11orf98E9PRG8 122 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 M0R3G1 203 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 PLPP3O14495 311 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 CBR3O75828 277 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 IMPDH2P12268 514 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 MYL12AP19105 171 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 IDUAP35475 653 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 ATP6V1E1P36543 226 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 TGFBR2P37173 567 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 CDKN2AP42771 156 aaKnown RBP16.43■□□□□ 0.22
PHGDH-209ENST00000641074 SLC16A1P53985 500 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 RPS7P62081 194 aaKnown RBP16.43■□□□□ 0.22
PHGDH-209ENST00000641074 SPINK14Q6IE38 97 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 C3orf33Q6P1S2 294 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 SLC16A12Q6ZSM3 486 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 ANKRD13BQ86YJ7 626 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 GTPBP8Q8N3Z3 284 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-209ENST00000641074 PROKR2Q8NFJ6 384 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 OR51G2Q8NGK0 314 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 MND1Q9BWT6 205 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 TMEM185BQ9H7F4 350 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 GRHPRQ9UBQ7 328 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 ENPP5Q9UJA9 477 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 CDV3Q9UKY7 258 aaKnown RBP16.43■□□□□ 0.22
PHGDH-209ENST00000641074 PTPRZ1P23471 2315 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-209ENST00000641074 CELSR3Q9NYQ7 3312 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 J3QRE1 110 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 RNF13O43567 381 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 ZIC3O60481 467 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 OPN1LWP04000 364 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 HSMCR30P0CW71 290 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 NR4A1P22736 598 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 AHCYP23526 432 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 PCSK6P29122 969 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 TMED1Q13445 227 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 MFSD13AQ14CX5 517 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 RTP5Q14D33 572 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.43■□□□□ 0.225e-8■■■□□ 19.2
PHGDH-209ENST00000641074 ARMCX4Q5H9R4 360 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 EMC4Q5J8M3 183 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 LEG1Q6P5S2 330 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 TUBA3EQ6PEY2 450 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 RAB2BQ8WUD1 216 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 MGLLQ99685 303 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 INIPQ9NRY2 104 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 DEPPQ9NTK1 212 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 TNFRSF10DQ9UBN6 386 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 ZNF346Q9UL40 294 aaKnown RBP16.43■□□□□ 0.22
PHGDH-209ENST00000641074 EXOSC1Q9Y3B2 195 aaKnown RBP16.43■□□□□ 0.22
PHGDH-209ENST00000641074 CORINQ9Y5Q5 1042 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 SPIN1Q9Y657 262 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-209ENST00000641074 MED13Q9UHV7 2174 aa16.43■□□□□ 0.22
PHGDH-209ENST00000641074 ARGFXA6NJG6 315 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 LIPT2A6NK58 231 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 MYL12BO14950 172 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 NKX2-8O15522 239 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 NOL3O60936 208 aaKnown RBP16.42■□□□□ 0.22
PHGDH-209ENST00000641074 NEURL1O76050 574 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 OR6A2O95222 327 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 ATE1O95260 518 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 IGHA1P01876 353 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 LIMS3P0CW19 117 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 LIMS4P0CW20 117 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 CD36P16671 472 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 GPR85P60893 370 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 C19orf57Q0VDD7 668 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 MYBPHQ13203 477 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 SELENBP1Q13228 472 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 SPHARQ15513 63 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 GLYR1Q49A26 553 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-209ENST00000641074 MESTQ5EB52 335 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 ARMC4Q5T2S8 1044 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 LINC00696Q6ZRV3 163 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 JAZF1Q86VZ6 243 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 UTP23Q9BRU9 249 aaKnown RBP16.42■□□□□ 0.22
PHGDH-209ENST00000641074 NMNAT2Q9BZQ4 307 aa16.42■□□□□ 0.22
PHGDH-209ENST00000641074 CHCHD3Q9NX63 227 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms