RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 CDC40O60508 579 aaKnown RBP eCLIP10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 HCN1O60741 890 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 MT-ND2P03891 347 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 HMGN1P05114 100 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SAGP10523 405 aaPredicted RBP10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 BMP7P18075 431 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 PGCP20142 388 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 CHRNB4P30926 498 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 NUDT6P53370 316 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 ZNF117Q03924 483 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 CRYZQ08257 329 aaKnown RBP10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 CBFBQ13951 182 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 RAB39AQ14964 217 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 PGGHGQ32M88 737 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 KRTAP21-3Q3LHN1 58 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 ELOA3BQ3SY89 546 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SLC25A30Q5SVS4 291 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 CBLN3Q6UW01 205 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 DMRTC2Q8IXT2 367 aaPredicted RBP10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SLC43A2Q8N370 569 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 STX19Q8N4C7 294 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SLC15A4Q8N697 577 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 ELOA3Q8NG57 546 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 OR2T33Q8NG76 320 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 FANK1Q8TC84 345 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 HGDQ93099 445 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SGTBQ96EQ0 304 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SH3YL1Q96HL8 342 aaPredicted RBP10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 PLEKHA8Q96JA3 519 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SAMD8Q96LT4 415 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SLC19A3Q9BZV2 496 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 OR52D1Q9H346 318 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 C12orf10Q9HB07 376 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 MEPEQ9NQ76 525 aaPredicted RBP10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 C20orf141Q9NUB4 165 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 FKBP14Q9NWM8 211 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 RPL36Q9Y3U8 105 aaKnown RBP10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 CEPT1Q9Y6K0 416 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 MPDZO75970 2070 aa10.72□□□□□ -0.69
ERGIC3-220ENST00000640748 SNTNA6NMZ2 147 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 ZNF99A8MXY4 864 aaPredicted RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 H3BSA7 217 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 GNB5O14775 395 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 HCRTR2O43614 444 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 TLX2O43763 284 aaPredicted RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 PRKYO43930 277 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 DNAJC13O75165 2243 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 ENTPD6O75354 484 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 IGF2P01344 180 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 CDK1P06493 297 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 PIPP12273 146 aaPredicted RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 PCMT1P22061 227 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 GRK5P34947 590 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 SLC1A3P43003 542 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 P2RX1P51575 399 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 EMX1Q04741 257 aaPredicted RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 PMPCAQ10713 525 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 TMEM44Q2T9K0 475 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 CNPY1Q3B7I2 92 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 CLEC12AQ5QGZ9 265 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 XAF1Q6GPH4 301 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 TMEM211Q6ICI0 200 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 ARHGAP11AQ6P4F7 1023 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 SMARCD3Q6STE5 483 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 ATG4DQ86TL0 474 aaPredicted RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 CLVS1Q8IUQ0 354 aaPredicted RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 TMEM156Q8N614 296 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 PSD4Q8NDX1 1056 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 OR13C2Q8NGS9 318 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 OR4Q3Q8NH05 313 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 OR5W2Q8NH69 310 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 B4GALNT2Q8NHY0 566 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 TMEM163Q8TC26 289 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 ASB5Q8WWX0 329 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 NRGNQ92686 78 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 RND1Q92730 232 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 MUL1Q969V5 352 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 TMEM43Q9BTV4 400 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 RTN4RQ9BZR6 473 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 DEFB127Q9H1M4 99 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 TP63Q9H3D4 680 aaPredicted RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 PCNX3Q9H6A9 2034 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 ZDHHC11Q9H8X9 412 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 RYDENQ9NUL5 291 aaKnown RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 MED17Q9NVC6 651 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 DNAJC27Q9NZQ0 273 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 MYOTQ9UBF9 498 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 RSL24D1Q9UHA3 163 aaKnown RBP10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 BAIAP2Q9UQB8 552 aa10.71□□□□□ -0.69
ERGIC3-220ENST00000640748 MAP1AP78559 2803 aaPredicted RBP10.71□□□□□ -0.7
ERGIC3-220ENST00000640748 SURF4O15260 269 aa10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 NOL3O60936 208 aaKnown RBP10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 PTP4A3O75365 173 aa10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 OR2J2O76002 312 aa10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 SEC14L2O76054 403 aa10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 GLSO94925 669 aaPredicted RBP10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 NUDT14O95848 222 aa10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 HOXD4P09016 255 aaPredicted RBP10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 FBXO45P0C2W1 286 aa10.7□□□□□ -0.7
ERGIC3-220ENST00000640748 FUT1P19526 365 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms