RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 RRADP55042 308 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 CDC20Q12834 499 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 FGFBP1Q14512 234 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 NRF1Q16656 503 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF791Q3KP31 576 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ACER2Q5QJU3 275 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 FNDC7Q5VTL7 733 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 B3GNTL1Q67FW5 361 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 OPN5Q6U736 354 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 CARM1Q86X55 608 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 RBM45Q8IUH3 476 aaKnown RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 LACC1Q8IV20 430 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SPACA3Q8IXA5 215 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 OR6T1Q8NGN1 323 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 OR5M3Q8NGP4 307 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 VANGL1Q8TAA9 524 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 HGDQ93099 445 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SAT2Q96F10 170 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 WDFY2Q96P53 400 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ARHGDIGQ99819 225 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 AMBRA1Q9C0C7 1298 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 LHPPQ9H008 270 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SCPEP1Q9HB40 452 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 AGPAT4Q9NRZ5 378 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 FKBP14Q9NWM8 211 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 KLHL28Q9NXS3 571 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ALKBH4Q9NXW9 302 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 RIMS3Q9UJD0 308 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ABCG2Q9UNQ0 655 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SLC9A8Q9Y2E8 581 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 CPAMD8Q8IZJ3 1885 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 EML6Q6ZMW3 1958 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 A0A1W2PQD3 144 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 ADAM10O14672 748 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 FADS1O60427 444 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 CYTIPO60759 359 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 SEMA7AO75326 666 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 DIRAS1O95057 198 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 FASP25445 335 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 BMI1P35226 326 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 IL13RA1P78552 427 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 SLC34A1Q06495 639 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 CD226Q15762 336 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 NPTX1Q15818 432 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 ATP6AP1Q15904 470 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 MEP1AQ16819 746 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 ZSWIM7Q19AV6 140 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 RNFT1Q5M7Z0 435 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 CST9LP1Q5W188 147 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 HMBOX1Q6NT76 420 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 Q6ZS46 218 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 MCEMP1Q8IX19 187 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 BCL6BQ8N143 479 aaPredicted RBP7.23□□□□□ -1.25
SCARB2-220ENST00000640076 OR10G3Q8NGC4 313 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 RNF138Q8WVD3 245 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 CNOT9Q92600 299 aaKnown RBP7.23□□□□□ -1.25
SCARB2-220ENST00000640076 GATA6Q92908 595 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF300Q96RE9 604 aaPredicted RBP7.23□□□□□ -1.25
SCARB2-220ENST00000640076 NODALQ96S42 347 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 RTN4RQ9BZR6 473 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 ADNPQ9H2P0 1102 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 ARMC7Q9H6L4 198 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 JKAMPQ9P055 326 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 SLC45A2Q9UMX9 530 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 ENPP4Q9Y6X5 453 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 COMMD3-BMI1R4GMX3 469 aa7.23□□□□□ -1.25
SCARB2-220ENST00000640076 NDUFS8O00217 210 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 CLOCKO15516 846 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 TPST2O60704 377 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 PRSS23O95084 383 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 SCAF4O95104 1147 aaKnown RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 CST1P01037 141 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 CSTAP01040 98 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 LDLRP01130 860 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 ANXA8P13928 327 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 ITGA2P17301 1181 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 YAP1P46937 504 aaKnown RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF136P52737 540 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 RGS8P57771 180 aaPredicted RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 IL20RBQ6UXL0 311 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 AMIGO2Q86SJ2 522 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 DND1Q8IYX4 353 aaKnown RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 GALNT16Q8N428 558 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 TMEM156Q8N614 296 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 GATSQ8NAP1 163 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 FAM71CQ8NEG0 241 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 GRHL3Q8TE85 626 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 SLC35B4Q969S0 331 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 RNF166Q96A37 237 aaPredicted RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 PPP1R14BQ96C90 147 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 TMCO6Q96DC7 493 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 TBL1XR1Q9BZK7 514 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 ING2Q9H160 280 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 EVA1AQ9H8M9 152 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 SLC35A3Q9Y2D2 325 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 PCNX3Q9H6A9 2034 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 H3BNH8 94 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 TP53I11O14683 189 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 FFAR1O14842 300 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 OIP5O43482 229 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms