RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SYS1Q8N2H4 156 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 MS4A15Q8N5U1 240 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 C7orf57Q8NEG2 295 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 RHBDD1Q8TEB9 315 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 NMNAT2Q9BZQ4 307 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 RTN4RQ9BZR6 473 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 KLHL1Q9NR64 748 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 NPAP1Q9NZP6 1156 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ST6GALNAC2Q9UJ37 374 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 HIF3AQ9Y2N7 669 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 KMT2EQ8IZD2 1858 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 OR6C68A6NDL8 312 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 C17orf51A8MQB3 221 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 ICOSLGO75144 302 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 HLA-DQB1P01920 261 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 FGF5P12034 268 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 SPI1P17947 270 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 MYL9P24844 172 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 NAA10P41227 235 aaPredicted RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 TMED10P49755 219 aaKnown RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 DCAF7P61962 342 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 ERVK-25P63136 954 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 IL18Q14116 193 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 TP53I3Q53FA7 332 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 IDNKQ5T6J7 187 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 HLA-DQA1Q5Y7H0 255 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 C16orf47Q6ZP98 133 aaPredicted RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 RAB43Q86YS6 212 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 SLC35F2Q8IXU6 374 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 Q8N402 240 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 AGBL5Q8NDL9 886 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 MOSPD2Q8NHP6 518 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 ZNRF4Q8WWF5 429 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 GHSRQ92847 366 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 RASD2Q96D21 266 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 SPSB2Q99619 263 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 KLHDC3Q9BQ90 382 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 TTTY10Q9BZA0 68 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 C11orf54Q9H0W9 315 aaPredicted RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 NANSQ9NR45 359 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 WDR70Q9NW82 654 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 MALT1Q9UDY8 824 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 PAIP2BQ9ULR5 123 aaKnown RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 BLOC1S5-TXNDC5H3BN57 136 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 MEN1O00255 615 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 OGG1O15527 345 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 ALOX12BO75342 701 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 SLC2A2P11168 524 aaPredicted RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 LCN1P31025 176 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 HTR3AP46098 478 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 IL10RAQ13651 578 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 CLPPQ16740 277 aaPredicted RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 CDONQ4KMG0 1287 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 ACSM3Q53FZ2 586 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 FAM199XQ6PEV8 388 aaPredicted RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 DBX2Q6ZNG2 339 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 SLC29A4Q7RTT9 530 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF441Q8N8Z8 693 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 KCTD12Q96CX2 325 aaKnown RBP13.72□□□□□ -0.21
TRIM3-215ENST00000639856 PELI1Q96FA3 418 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 MOGAT1Q96PD6 335 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 MMP25Q9NPA2 562 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 INIPQ9NRY2 104 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 RXFP3Q9NSD7 469 aa13.72□□□□□ -0.21
TRIM3-215ENST00000639856 VSTM2BA6NLU5 285 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 IMPA2O14732 288 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 PLA2G10O15496 165 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 ACP1P24666 158 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 AQP2P41181 271 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 GBX2P52951 348 aaPredicted RBP13.71□□□□□ -0.21
TRIM3-215ENST00000639856 EGR4Q05215 589 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 PLCXD2Q0VAA5 305 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 IL11RAQ14626 422 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 CCDC157Q569K6 752 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 PLA2G2CQ5R387 149 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF544Q6NX49 715 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 FAM122BQ7Z309 247 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 C10orf53Q8N6V4 93 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 TEX19Q8NA77 164 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 APCDD1LQ8NCL9 501 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 ZPLD1Q8TCW7 415 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 SNX33Q8WV41 574 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF524Q96C55 264 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 C8orf44Q96CB5 159 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 SMIM19Q96E16 107 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 UBL7Q96S82 380 aaPredicted RBP13.71□□□□□ -0.21
TRIM3-215ENST00000639856 LAT2Q9GZY6 243 aa13.71□□□□□ -0.21
TRIM3-215ENST00000639856 TEX51A0A1B0GUA7 166 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 MAGEB4O15481 346 aaPredicted RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 ONECUT2O95948 504 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 ASAH2BP0C7U1 165 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 ZNF883P0CG24 379 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 APEHP13798 732 aaKnown RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 ABCD3P28288 659 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 IL12BP29460 328 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 EMP2P54851 167 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 TRA2AQ13595 282 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 CDK5R1Q15078 307 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms