RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 SLC17A5Q9NRA2 495 aa3.79□□□□□ -1.8
GABRA1-220ENST00000638159 MRPS18CQ9Y3D5 142 aaKnown RBP3.79□□□□□ -1.8
GABRA1-220ENST00000638159 PCDH7O60245 1069 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 CNIH1O95406 144 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 IGHMP01871 453 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 IL7RP16871 459 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 GABRA2P47869 451 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 P2RX1P51575 399 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ROR2Q01974 943 aaKnown RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 VMACQ2NL98 169 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 PAQR3Q6TCH7 311 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 CCDC91Q7Z6B0 441 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 CNPY4Q8N129 248 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 NATD1Q8N6N6 113 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 PLPP7Q8NBV4 271 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ST8SIA1Q92185 356 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 MS4A6EQ96DS6 147 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 MFSD3Q96ES6 412 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ANKZF1Q9H8Y5 726 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 BCO1Q9HAY6 547 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 CHRAC1Q9NRG0 131 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 SLC6A13Q9NSD5 602 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 EGFL7Q9UHF1 273 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 PYCARDQ9ULZ3 195 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ACOT9Q9Y305 439 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 PCYT1BQ9Y5K3 369 aaPredicted RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 NPTNQ9Y639 398 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 TP53BP1Q12888 1972 aaPredicted RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 UTP20O75691 2785 aaKnown RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ZNF816-ZNF321PA0A0X1KG74 233 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 A0A1B0GW55 424 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 A0A1W2PRB8 838 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 EPHB6O15197 1021 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 XRCC3O43542 346 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 AKAP10O43572 662 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 PRKNO60260 465 aaPredicted RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 EIF4E2O60573 245 aaKnown RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 DUX4L2P0CJ85 424 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 DUX4L3P0CJ86 424 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 DUX4L5P0CJ88 424 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 DUX4L6P0CJ89 424 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 DUX4L7P0CJ90 424 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 APOBEC1P41238 236 aaKnown RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 PIK3CBP42338 1070 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 MAGEA6P43360 314 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 SLC18A1P54219 525 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 MGAT5Q09328 741 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 SRSF7Q16629 238 aaKnown RBP eCLIP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 CCSMST1Q4G0I0 132 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 DUX4L9Q6RFH8 374 aaPredicted RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 TRAPPC6BQ86SZ2 158 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ZNF321PQ8N8H1 164 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 OR5D13Q8NGL4 314 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ABHD4Q8TB40 342 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 XAGE5Q8WWM1 108 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 KTI12Q96EK9 354 aaPredicted RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 C16orf45Q96MC5 204 aaPredicted RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ERP44Q9BS26 406 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 MED17Q9NVC6 651 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 C14orf119Q9NWQ9 140 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 DUX4Q9UBX2 424 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 DCTN4Q9UJW0 460 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 PRAMEF27A3QJZ7 478 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ZNF264O43296 627 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 TRIM3O75382 744 aaPredicted RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 SEC22BO75396 215 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 SUPT7LO94864 414 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 SEMA3DO95025 777 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 HLA-DQA2P01906 255 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 CBR1P16152 277 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ARF1P84077 181 aaKnown RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 RFTN2Q52LD8 501 aaPredicted RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 RAB6CQ53S08 254 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 C6orf89Q6UWU4 347 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 TFAP2EQ6VUC0 442 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ZYG11AQ6WRX3 759 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 BRD3OSQ6XYD6 125 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 MTDHQ86UE4 582 aaKnown RBP3.78□□□□□ -1.8
GABRA1-220ENST00000638159 VRK3Q8IV63 474 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 C17orf47Q8NEP4 570 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 NODALQ96S42 347 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 SPATA25Q9BR10 227 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 RAB6CQ9H0N0 254 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 SLC2A8Q9NY64 477 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ARMCX1Q9P291 453 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 PRSS50Q9UI38 385 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 ZDHHC8Q9ULC8 765 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 RASD1Q9Y272 281 aa3.78□□□□□ -1.8
GABRA1-220ENST00000638159 TNRC6AQ8NDV7 1962 aaKnown RBP3.78□□□□□ -1.81
GABRA1-220ENST00000638159 A0A1W2PRG6 482 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 LRRC3CA6NJW4 275 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 ZNF724A8MTY0 619 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 SEC14L6B5MCN3 397 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 DNPH1O43598 174 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 NDUFA7O95182 113 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 FREM3P0C091 2139 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 PGAM1P18669 254 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 CRABP2P29373 138 aa3.77□□□□□ -1.81
GABRA1-220ENST00000638159 PEBP1P30086 187 aaKnown RBP3.77□□□□□ -1.81
GABRA1-220ENST00000638159 CEACAM3P40198 252 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms