RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 NPIPB9F8W1W9 429 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 ARPC1BO15143 372 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 SNAPC5O75971 98 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZFPL1O95159 310 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 GDI1P31150 447 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 PSMD4P55036 377 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 TSPAN5P62079 268 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 TMEM69Q5SWH9 247 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNF684Q5T5D7 378 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 PWWP2BQ6NUJ5 590 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 GLDNQ6ZMI3 551 aaPredicted RBP18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 PCNPQ8WW12 178 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 RGP1Q92546 391 aaPredicted RBP18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 FBRSQ9HAH7 460 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 KLK11Q9UBX7 282 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 KIF25Q9UIL4 384 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 POMT2Q9UKY4 750 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 C5orf42Q9H799 3197 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 MYOGP15173 224 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 MNDAP41218 407 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 NANOS3P60323 173 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 PRPS1P60891 318 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 DHODHQ02127 395 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 TCTE1Q5JU00 501 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR2T4Q8NH00 348 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 SYNPRQ8TBG9 265 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZPLD1Q8TCW7 415 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 HERVK_113Q902F9 699 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 RBPMSQ93062 196 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 HAVCR1Q96D42 359 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 VSTM2LQ96N03 204 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 GPX7Q96SL4 187 aaPredicted RBP18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 GABRG3Q99928 467 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 KXD1Q9BQD3 176 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 RBCK1Q9BYM8 510 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 NOX3Q9HBY0 568 aa18.4■□□□□ 0.54
SYNGAP1-227ENST00000638142 A0A0J9YY10 115 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 TNFRSF10CO14798 259 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 IFNGR1P15260 489 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 RPS4XP62701 263 aaKnown RBP18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 GPM6BQ13491 265 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 SLC25A25Q6KCM7 469 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 PRSS42Q7Z5A4 293 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 SERPINA12Q8IW75 414 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 C1orf216Q8TAB5 229 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 NSMAFQ92636 917 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 RASD2Q96D21 266 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 UTP23Q9BRU9 249 aaKnown RBP18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 SLITRK2Q9H156 845 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 TAS2R10Q9NYW0 307 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 MGAT4CQ9UBM8 478 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 OR5V1Q9UGF6 321 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 IDSB3KWA1 339 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 ACOT7O00154 380 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 LDOC1O95751 146 aaPredicted RBP18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 GIPP09681 153 aaPredicted RBP18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 LINC01590Q5TEZ4 76 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 KCTD20Q7Z5Y7 419 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 PIGKQ92643 395 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 ARPC5LQ9BPX5 153 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 G6PC3Q9BUM1 346 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 SLC19A3Q9BZV2 496 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 RXFP3Q9NSD7 469 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 TAS2R5Q9NYW4 299 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 ETV7Q9Y603 341 aa18.39■□□□□ 0.53
SYNGAP1-227ENST00000638142 ATG2BQ96BY7 2078 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 FAM221BA6H8Z2 402 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 IMPA2O14732 288 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 RDH16O75452 317 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 TACSTD2P09758 323 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 MAPK3P27361 379 aaPredicted RBP18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 P2RX1P51575 399 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 ERVK-25P63136 954 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 RNF166Q96A37 237 aaPredicted RBP18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 MIB2Q96AX9 1013 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 BMFQ96LC9 184 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 ALG12Q9BV10 488 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 TPPPO94811 219 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 RAD52P43351 418 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 ART1P52961 327 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 CLDN12P56749 244 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 CCDC3Q9BQI4 270 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 SEC22CQ9BRL7 303 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 GPN1Q9HCN4 374 aaPredicted RBP18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 TCF7L1Q9HCS4 588 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 SCML1Q9UN30 329 aa18.38■□□□□ 0.53
SYNGAP1-227ENST00000638142 CREBL2O60519 120 aaPredicted RBP18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 CSTAP01040 98 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 IL5P05113 134 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 MECP2P51608 486 aaKnown RBP18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 OPCMLQ14982 345 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 Q499Y3 187 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 STAC2Q6ZMT1 411 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 FAM220AQ7Z4H9 259 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 MEIOBQ8N635 442 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 RCBTB1Q8NDN9 531 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 LHFPL5Q8TAF8 219 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 RIT1Q92963 219 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 WBP1Q96G27 269 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 RBM18Q96H35 190 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms