RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 LIMS1P48059 325 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 SLC9A3P48764 834 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 ASCL1P50553 236 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 RPS4XP62701 263 aaKnown RBP4.73□□□□□ -1.65
CHD2-224ENST00000636410 LSM11P83369 360 aaKnown RBP eCLIP4.73□□□□□ -1.65
CHD2-224ENST00000636410 IL1RL1Q01638 556 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 POU3F1Q03052 451 aaPredicted RBP4.73□□□□□ -1.65
CHD2-224ENST00000636410 PUDPQ08623 228 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 PMS2P3Q13401 168 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 SEC23BQ15437 767 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 CDSNQ15517 529 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 EXOC3L2Q2M3D2 409 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 FBXL19-AS1Q494R0 122 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 ANKDD1AQ495B1 522 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 TMEM225Q6GV28 225 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 OR2T5Q6IEZ7 315 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 TBPL2Q6SJ96 375 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 TMPRSS11FQ6ZWK6 438 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 H1FNTQ75WM6 255 aaPredicted RBP4.73□□□□□ -1.65
CHD2-224ENST00000636410 HIST3H2AQ7L7L0 130 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 RRM2BQ7LG56 351 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 NUFIP2Q7Z417 695 aaKnown RBP4.73□□□□□ -1.65
CHD2-224ENST00000636410 BTLAQ7Z6A9 289 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 UEVLDQ8IX04 471 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 CDK20Q8IZL9 346 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 LINC00471Q8N535 108 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 LRRC17Q8N6Y2 441 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 OR4K5Q8NGD3 323 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 OR9K2Q8NGE7 335 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 OR4C15Q8NGM1 316 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 OR2T29Q8NH02 315 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 OR52J3Q8NH60 311 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 LILRB4Q8NHJ6 448 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 HIST1H2ACQ93077 130 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 TMEM45BQ96B21 275 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 SLCO4A1Q96BD0 722 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 STARD4Q96DR4 205 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 FAM46AQ96IP4 442 aaKnown RBP4.73□□□□□ -1.65
CHD2-224ENST00000636410 OXGR1Q96P68 337 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 ALPK1Q96QP1 1244 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 CHID1Q9BWS9 393 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 C12orf49Q9H741 205 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 REEP1Q9H902 201 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 FANCFQ9NPI8 374 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 KCNJ16Q9NPI9 418 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 PLSCR4Q9NRQ2 329 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 CCM2LQ9NUG4 571 aaPredicted RBP4.73□□□□□ -1.65
CHD2-224ENST00000636410 ARMC1Q9NVT9 282 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 VNN3Q9NY84 501 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 JKAMPQ9P055 326 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 B3GAT1Q9P2W7 334 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 DNAJB9Q9UBS3 223 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 TMCC3Q9ULS5 477 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 NOSIPQ9Y314 301 aaKnown RBP4.73□□□□□ -1.65
CHD2-224ENST00000636410 NOX1Q9Y5S8 564 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 KLF2Q9Y5W3 355 aaPredicted RBP4.73□□□□□ -1.65
CHD2-224ENST00000636410 FLVCR1Q9Y5Y0 555 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 RELNP78509 3460 aa4.73□□□□□ -1.65
CHD2-224ENST00000636410 NKX2-6A6NCS4 301 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 ARRDC5A6NEK1 342 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 NPIPB13A6NJU9 1138 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 A8MXE2 369 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 NPIPB4C9JG80 1138 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 C11orf98E9PRG8 122 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 MS4A18H0YCH9 400 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 BLOC1S5-TXNDC5H3BN57 136 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 GNGT2O14610 69 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 CDC42EP2O14613 210 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 CLOCKO15516 846 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 HNRNPRO43390 633 aaKnown RBP4.72□□□□□ -1.65
CHD2-224ENST00000636410 KLF4O43474 513 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 RNF13O43567 381 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 TRAF3IP2O43734 574 aaPredicted RBP4.72□□□□□ -1.65
CHD2-224ENST00000636410 AKAP8O43823 692 aaKnown RBP4.72□□□□□ -1.65
CHD2-224ENST00000636410 OR10H3O60404 316 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 MRPL33O75394 65 aaKnown RBP4.72□□□□□ -1.65
CHD2-224ENST00000636410 DEAF1O75398 565 aaPredicted RBP4.72□□□□□ -1.65
CHD2-224ENST00000636410 TIPRLO75663 272 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 CCNB2O95067 398 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 CLDN1O95832 211 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 HPRP00739 348 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 FCGR1AP12314 374 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 ZNF43P17038 809 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 FUT1P19526 365 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 MAKP20794 623 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 AHCYP23526 432 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 FPR3P25089 353 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 DNAJA1P31689 397 aaKnown RBP4.72□□□□□ -1.65
CHD2-224ENST00000636410 IFNGR2P38484 337 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 OR3A2P47893 321 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 HMGA2P52926 109 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 CLDN17P56750 224 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 PRPS1P60891 318 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 RPL18Q07020 188 aaKnown RBP4.72□□□□□ -1.65
CHD2-224ENST00000636410 TFF3Q07654 80 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 ZP4Q12836 540 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 KPNB1Q14974 876 aaKnown RBP4.72□□□□□ -1.65
CHD2-224ENST00000636410 TAF11Q15544 211 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 MS4A18Q3C1V0 323 aa4.72□□□□□ -1.65
CHD2-224ENST00000636410 ZFP1Q6P2D0 407 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms