RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	SOCS6	O14544	535 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CTSV	O60911	334 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FASLG	P48023	281 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CLDN17	P56750	224 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	C17orf67	Q0P5P2	114 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	KEAP1	Q14145	624 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ELAVL1	Q15717	326 aa	Known RBP	13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	YRDC	Q86U90	279 aa	Known RBP	13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	KMT5C	Q86Y97	462 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RFT1	Q96AA3	541 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CALHM2	Q9HA72	323 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMED7	Q9Y3B3	224 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CHD8	Q9HCK8	2581 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997		A0A0X1KG70	313 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMEM269	A0A1B0GVZ9	245 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	BLACE	A4D250	179 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	HMGN4	O00479	90 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	KLK8	O60259	260 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NPR2	P20594	1047 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ELAVL4	P26378	380 aa	Known RBP	13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	GLP1R	P43220	463 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PITPNB	P48739	271 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ARHGDIB	P52566	201 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CDNF	Q49AH0	187 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	VHLL	Q6RSH7	139 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LINC00346	Q8IVM7	164 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF615	Q8N8J6	731 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ANKRD28	O15084	1053 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MRPL33	O75394	65 aa	Known RBP	13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MMP11	P24347	488 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	S100A10	P60903	97 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC23A3	Q6PIS1	610 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	URM1	Q9BTM9	101 aa	Known RBP	13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OR11A1	Q9GZK7	315 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ELOVL3	Q9HB03	270 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RGS9	O75916	674 aa	Predicted RBP	13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DAP3	P51398	398 aa	Known RBP	13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	HERV-K104	P61576	105 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC2A12	Q8TD20	617 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC35B4	Q969S0	331 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	KLHL13	Q9P2N7	655 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MMACHC	Q9Y4U1	282 aa		13.18	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LILRA5	A6NI73	299 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	UPK1A	O00322	258 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DNAJB5	O75953	348 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	HTR3B	O95264	441 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NSA2	O95478	260 aa	Known RBP	13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DDAH2	O95865	285 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PRH1	P02810	166 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TRHR	P34981	398 aa	Predicted RBP	13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CSNK2A1	P68400	391 aa	Predicted RBP	13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SPOCK1	Q08629	439 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NKPD1	Q17RQ9	610 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF584	Q8IVC4	421 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FCAMR	Q8WWV6	532 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LINC00615	Q96LM1	132 aa	Predicted RBP	13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	C1QTNF3	Q9BXJ4	246 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ENKD1	Q9H0I2	346 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RBM38	Q9H0Z9	239 aa	Known RBP	13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC6A13	Q9NSD5	602 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMEM74B	Q9NUR3	256 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NLK	Q9UBE8	527 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IGHV1OR21-1	A0A087WYE8	117 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FAM230A	A0A1W2PPH8	454 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ACOD1	A6NK06	481 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CRYAB	P02511	175 aa	Known RBP	13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	UCHL1	P09936	223 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CCL4	P13236	92 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CD40LG	P29965	261 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RPS27	P42677	84 aa	Known RBP	13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PRR18	Q8N4B5	295 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OR5H6	Q8NGV6	325 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SCP2D1	Q9UJQ7	156 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ABCA4	P78363	2273 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997		A0A087WUU8	490 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OR7A10	O76100	309 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	BID	P55957	195 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	EXT1	Q16394	746 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC22A6	Q4U2R8	563 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CCDC58	Q4VC31	144 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	AWAT2	Q6E213	333 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NIPAL3	Q6P499	406 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	BEND4	Q6ZU67	534 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FTMT	Q8N4E7	242 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PFN4	Q8NHR9	129 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.17	□□□□□ -0.3	2e-6	■■□□□ 12.1
NEDD4L-238	ENST00000635997	RASD2	Q96D21	266 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CTSF	Q9UBX1	484 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MED16	Q9Y2X0	877 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC6A5	Q9Y345	797 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC22A7	Q9Y694	548 aa		13.17	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TRAV17	A0A0B4J275	112 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997		A0A1W2PNR3	127 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CD3G	P09693	182 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IL32	P24001	234 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IL11RA	Q14626	422 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF691	Q5VV52	312 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	AAED1	Q7RTV5	226 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms