RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PCF11O94913 1555 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 IGLV5-52A0A0A0MRZ9 124 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 OR5K3A6NET4 321 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 PRR23AA6NEV1 266 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CASTOR2A6NHX0 329 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 LRRC30A6NM36 301 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CENPXA8MT69 81 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 LINC00587B1AMM8 73 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 ATP6V1G2-DDX39BF2Z307 99 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 F8W036 122 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 G3V3Y1 287 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 H3BNH8 94 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 H3BTX0 84 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 M0R3G1 203 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 OR7A17O14581 309 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 TFECO14948 347 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CHUKO15111 745 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 MAGEB4O15481 346 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 RAMP3O60896 148 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CCNKO75909 580 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GAGE7O76087 117 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SRP72O76094 671 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 FARS2O95363 451 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GJB5O95377 273 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CTDNEP1O95476 244 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 ANGPTL1O95841 491 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 TSPAN13O95857 204 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SERPINA1P01009 418 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 PPBPP02775 128 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 VTNP04004 478 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CALB1P05937 261 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CDK1P06493 297 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GAGE12FP0CL80 117 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GAGE12GP0CL81 117 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GAGE12IP0CL82 117 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 IGHV4-30-4P0DP06 118 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 UQCRBP14927 111 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 BCKDHBP21953 392 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 WARSP23381 471 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SHMT2P34897 504 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 NUDT1P36639 197 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 PRLHRP49683 370 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 NOVA1P51513 510 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 DNA2P51530 1060 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 NR0B1P51843 470 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 EFNB2P52799 333 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 MAZP56270 477 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM50BP56557 158 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 VLDLRP98155 873 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SP3Q02447 781 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 KLRC3Q07444 240 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GAGE1Q13065 139 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GAGE4Q13068 117 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SELENBP1Q13228 472 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 IL18R1Q13478 541 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CDH18Q13634 790 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GPNMBQ14956 572 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 EXOSC7Q15024 291 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 PTGES3Q15185 160 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 POU2AF1Q16633 256 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM176BQ3YBM2 270 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 VPS26BQ4G0F5 336 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 ACSF3Q4G176 576 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 RAB6CQ53S08 254 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SPIN3Q5JUX0 258 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SAMD4BQ5PRF9 694 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 PAPPA-AS1Q5QFB9 102 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 LY6G6FQ5SQ64 297 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 MARC1Q5VT66 337 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 LYPLAL1Q5VWZ2 237 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 RESP18Q5W5W9 173 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 NSUN5P2Q63ZY6 315 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF776Q68DI1 518 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 C22orf42Q6IC83 251 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 C4orf22Q6V702 233 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 RBMS3Q6XE24 437 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 C18orf65Q6ZTR6 163 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 FAM92BQ6ZTR7 304 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 STOX1Q6ZVD7 989 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CPEB2Q7Z5Q1 589 aaKnown RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 HORMAD1Q86X24 394 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 MARCH9Q86YJ5 346 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 CLDN19Q8N6F1 224 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 GCSAMQ8N6F7 178 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM251Q8N6I4 163 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SLC37A3Q8NCC5 494 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 PXT1Q8NFP0 134 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 OR2AK2Q8NG84 335 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 OR51D1Q8NGF3 324 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 OR1J2Q8NGS2 313 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 OR2Y1Q8NGV0 311 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 OR6N2Q8NGY6 317 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 PIGXQ8TBF5 258 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 BLOC1S5Q8TDH9 187 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 APH1BQ8WW43 257 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM37Q8WXS4 190 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 RORBQ92753 470 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 ANKRD9Q96BM1 317 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-208ENST00000635562 WDR34Q96EX3 536 aa2.59□□□□□ -1.99
PSPC1-208ENST00000635562 SCRN2Q96FV2 425 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms