RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ARF1P84077 181 aaKnown RBP17.33■□□□□ 0.36
TARDBP-228ENST00000629725 EMX2Q04743 252 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 BNIP2Q12982 314 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 SYPL1Q16563 259 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 MRPL2Q5T653 305 aaKnown RBP17.33■□□□□ 0.36
TARDBP-228ENST00000629725 GSPT2Q8IYD1 628 aaKnown RBP17.33■□□□□ 0.36
TARDBP-228ENST00000629725 VPS37AQ8NEZ2 397 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 RDH5Q92781 318 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 MRPL24Q96A35 216 aaKnown RBP17.33■□□□□ 0.36
TARDBP-228ENST00000629725 TRNT1Q96Q11 434 aaKnown RBP17.33■□□□□ 0.36
TARDBP-228ENST00000629725 MRPL37Q9BZE1 423 aaKnown RBP17.33■□□□□ 0.36
TARDBP-228ENST00000629725 DPY30Q9C005 99 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 SLC38A1Q9H2H9 487 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 ZDHHC2Q9UIJ5 367 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 TRAV20A0A0B4J274 112 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF503-AS2A6NEH8 195 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 A8MVM7 634 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 WNT9BO14905 357 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 HPXP02790 462 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 TCN1P20061 433 aaPredicted RBP17.32■□□□□ 0.36
TARDBP-228ENST00000629725 NR4A1P22736 598 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 CAPZA2P47755 286 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 TMEM33P57088 247 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 PDLIM3Q53GG5 364 aaPredicted RBP17.32■□□□□ 0.36
TARDBP-228ENST00000629725 ANXA8L1Q5VT79 327 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 C1orf229Q6ZS94 237 aaPredicted RBP17.32■□□□□ 0.36
TARDBP-228ENST00000629725 MDP1Q86V88 176 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 ANKFN1Q8N957 763 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 SLC35A5Q9BS91 424 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 MTHFD2LQ9H903 347 aaPredicted RBP17.32■□□□□ 0.36
TARDBP-228ENST00000629725 ASIC5Q9NY37 505 aa17.32■□□□□ 0.36
TARDBP-228ENST00000629725 LOC105371242A0A075B767 164 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 TMPRSS2O15393 492 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 FRS3O43559 492 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 RPS4Y1P22090 263 aaKnown RBP17.31■□□□□ 0.36
TARDBP-228ENST00000629725 CLDN17P56750 224 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 C1orf140Q5VVS0 124 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 REP15Q6BDI9 236 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 LRRC74BQ6ZQY2 392 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 CCDC36Q8IYA8 594 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF440Q8IYI8 595 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 SUCNR1Q9BXA5 334 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF696Q9H7X3 374 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF275Q9NSD4 429 aaPredicted RBP17.31■□□□□ 0.36
TARDBP-228ENST00000629725 RLIMQ9NVW2 624 aa17.31■□□□□ 0.36
TARDBP-228ENST00000629725 PPIHO43447 177 aaKnown RBP17.3■□□□□ 0.36
TARDBP-228ENST00000629725 SLC43A1O75387 559 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF432O94892 652 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 DBIP07108 87 aaKnown RBP17.3■□□□□ 0.36
TARDBP-228ENST00000629725 TFPTP0C1Z6 253 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 GKN3PP0CG01 181 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 ANPEPP15144 967 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF43P17038 809 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 ARRB2P32121 409 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 SERPINB5P36952 375 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 COPZ1P61923 177 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 LMO4P61968 165 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 MYBPC1Q00872 1141 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 MSMPQ1L6U9 139 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 CEACAM16Q2WEN9 425 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF311Q5JNZ3 666 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 WBP2NLQ6ICG8 309 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 RNF130Q86XS8 419 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 KDM8Q8N371 416 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 GPR137CQ8N3F9 429 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 CADM2Q8N3J6 435 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 PPCSQ9HAB8 311 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 GPR35Q9HC97 309 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 PRDM4Q9UKN5 801 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 RCE1Q9Y256 329 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 PCDHGB1Q9Y5G3 927 aa17.3■□□□□ 0.36
TARDBP-228ENST00000629725 AVPP01185 164 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 C1QCP02747 245 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 GSNP06396 782 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 ALDH3B1P43353 468 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 CASP8Q14790 479 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 SMU1Q2TAY7 513 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 RIBC1Q8N443 379 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-228ENST00000629725 EPS8L3Q8TE67 593 aaKnown RBP17.29■□□□□ 0.36
TARDBP-228ENST00000629725 YIPF5Q969M3 257 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF837Q96EG3 531 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-228ENST00000629725 APOPT1Q96IL0 206 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 SYT3Q9BQG1 590 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF747Q9BV97 191 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 G6PC2Q9NQR9 355 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 NOX1Q9Y5S8 564 aa17.29■□□□□ 0.36
TARDBP-228ENST00000629725 WNK2Q9Y3S1 2297 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 A0A096LPI6 279 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 CDHR4A6H8M9 788 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 NPIPB7O75200 414 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 GLRXP35754 106 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 ACAA2P42765 397 aaKnown RBP17.28■□□□□ 0.36
TARDBP-228ENST00000629725 SEC24CP53992 1094 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 MRPS11P82912 194 aaKnown RBP17.28■□□□□ 0.36
TARDBP-228ENST00000629725 DEFA6Q01524 100 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 SHISA2Q6UWI4 295 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 PEX5LQ8IYB4 626 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 UBLCP1Q8WVY7 318 aaPredicted RBP17.28■□□□□ 0.36
TARDBP-228ENST00000629725 SLC6A7Q99884 636 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF416Q9BWM5 594 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms