RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ARRDC5A6NEK1 342 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 GLOD5A6NK44 160 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 KDM4EB2RXH2 506 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 J3QRK9 145 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PROM1O43490 865 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PFDN1O60925 122 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 FAM20BO75063 409 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 CYC1P08574 325 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TFPTP0C1Z6 253 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF10P21506 573 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 HCFC1P51610 2035 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 HMGA2P52926 109 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 CTXN1P60606 82 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 IKZF1Q13422 519 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SCARB2Q14108 478 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TBCEQ15813 527 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 IFI44LQ53G44 452 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 NKAPLQ5M9Q1 402 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 C1orf185Q5T7R7 199 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 RTL6Q6ICC9 239 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PLXDC2Q6UX71 529 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF554Q86TJ5 538 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 P2RY8Q86VZ1 359 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 OR4K1Q8NGD4 311 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 NDNFQ8TB73 568 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 GIPC3Q8TF64 312 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PHF3Q92576 2039 aaKnown RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PPCDCQ96CD2 204 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF764Q96H86 408 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 DACH2Q96NX9 599 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ADAP2Q9NPF8 381 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SH3BP4Q9P0V3 963 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PSORS1C1Q9UIG5 152 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 CAMK2AQ9UQM7 478 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PLCE1Q9P212 2302 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CLDN24A6NM45 220 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 TNFRSF11BO00300 401 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SEMA3DO95025 777 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 FADS2O95864 444 aaKnown RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CBLP22681 906 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 AQP1P29972 269 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 AHRP35869 848 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 FRKP42685 505 aaPredicted RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 REEP5Q00765 189 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SRYQ05066 204 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ELAVL1Q15717 326 aaKnown RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SLC22A10Q63ZE4 541 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 RTL4Q6ZR62 310 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 TRILQ7L0X0 811 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SLC30A8Q8IWU4 369 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CENPSQ8N2Z9 138 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF540Q8NDQ6 660 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OR10G2Q8NGC3 310 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 RHOXF1Q8NHV9 184 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 NFKBIDQ8NI38 313 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SLC2A12Q8TD20 617 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 GEMIN6Q8WXD5 167 aaKnown RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 FCGR1BQ92637 280 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 UBE2E3Q969T4 207 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 RBM18Q96H35 190 aaKnown RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 FEVQ99581 238 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 FOXC2Q99958 501 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CCDC90BQ9GZT6 254 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OR51B5Q9H339 312 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 RLIMQ9NVW2 624 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 RHBDL2Q9NX52 303 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 TAS2R9Q9NYW1 312 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 POFUT2Q9Y2G5 429 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SLC6A5Q9Y345 797 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 MMACHCQ9Y4U1 282 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CLDN25C9JDP6 229 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 HRKO00198 91 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 PRKRAO75569 313 aaKnown RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 TGFB1P01137 390 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OPN1SWP03999 348 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 GBAP04062 536 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 IL3P08700 152 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ANXA8P13928 327 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 TNFRSF1BP20333 461 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 NR4A1P22736 598 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CRATP43155 626 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SSR2P43308 183 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 DCAF7P61962 342 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 PHEXP78562 749 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 CDK6Q00534 326 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 C2orf80Q0P641 193 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 IRF3Q14653 427 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF846Q147U1 533 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 NNATQ16517 81 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 MICAQ29983 383 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 NDUFAF5Q5TEU4 345 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 SAXO2Q658L1 398 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF770Q6IQ21 691 aaPredicted RBP4.36□□□□□ -1.71
LINC00550-201ENST00000629293 NIPAL1Q6NVV3 410 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OPN5Q6U736 354 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 RNF130Q86XS8 419 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 PRR22Q8IZ63 422 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 GCNT2Q8N0V5 402 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 OR10G3Q8NGC4 313 aa4.36□□□□□ -1.71
LINC00550-201ENST00000629293 MIPOL1Q8TD10 442 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms