RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 HAVCR1Q96D42 359 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 CNRIP1Q96F85 164 aaPredicted RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 PRMT8Q9NR22 394 aaPredicted RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 FBXO4Q9UKT5 387 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 Q9Y3F1 56 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 ZNF337Q9Y3M9 751 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 SDK1Q7Z5N4 2213 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 MEX3AA1L020 520 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 NEDD8-MDP1E9PL57 170 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 ZNF749O43361 778 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 EIF4E2O60573 245 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 SNAPINO95295 136 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 TSC22D1Q15714 1073 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 MRM1Q6IN84 353 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 JMJD6Q6NYC1 403 aaPredicted RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 C2orf15Q8WU43 125 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 POFUT1Q9H488 388 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 C6orf106Q9H6K1 298 aaPredicted RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 ZNF334Q9HCZ1 680 aaPredicted RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 MRPS30Q9NP92 439 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 CDV3Q9UKY7 258 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 ACTL6AO96019 429 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 ST8SIA6P61647 398 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 MRPS10P82664 201 aaKnown RBP13.94□□□□□ -0.18
PMS1-221ENST00000624204 MICBQ29980 383 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 OR4C11Q6IEV9 310 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 C5orf46Q6UWT4 87 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 GTPBP8Q8N3Z3 284 aaPredicted RBP13.94□□□□□ -0.18
PMS1-221ENST00000624204 PHOSPHO1Q8TCT1 267 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
PMS1-221ENST00000624204 NKD1Q969G9 470 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 BPIFA2Q96DR5 249 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 APMAPQ9HDC9 416 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 CLDND1Q9NY35 253 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 CENPVL1A0A0U1RR11 272 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 ZIC2O95409 532 aaPredicted RBP13.94□□□□□ -0.18
PMS1-221ENST00000624204 RAB40ALP0C0E4 278 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 TGIF1Q15583 401 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 DHRS7BQ6IAN0 325 aaPredicted RBP13.94□□□□□ -0.18
PMS1-221ENST00000624204 FAM109BQ6ICB4 259 aaPredicted RBP13.94□□□□□ -0.18
PMS1-221ENST00000624204 SLC16A11Q8NCK7 471 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 RAB40AQ8WXH6 277 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 UTP23Q9BRU9 249 aaKnown RBP13.94□□□□□ -0.18
PMS1-221ENST00000624204 NOP16Q9Y3C1 178 aaKnown RBP13.94□□□□□ -0.18
PMS1-221ENST00000624204 WDR45Q9Y484 360 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 YIPF1Q9Y548 306 aa13.94□□□□□ -0.18
PMS1-221ENST00000624204 OGG1O15527 345 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 EIF1BO60739 113 aaKnown RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 POP7O75817 140 aaKnown RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 CD3DP04234 171 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 F3P13726 295 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 EIF1P41567 113 aaKnown RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 PLEKHN1Q494U1 663 aaPredicted RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 ARMC10Q8N2F6 343 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 OR56A1Q8NGH5 318 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 CASTOR1Q8WTX7 329 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 GAREM1Q9H706 876 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 OR2S2Q9NQN1 319 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 DPP7Q9UHL4 492 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 ZNF443Q9Y2A4 671 aaPredicted RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 OR2T1O43869 369 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 TBX19O60806 448 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 SMIM6P0DI80 62 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 AQP2P41181 271 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 TEAD2Q15562 447 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 NKPD1Q17RQ9 610 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 LDLRAD1Q5T700 205 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 GLT8D1Q68CQ7 371 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 RPL22L1Q6P5R6 122 aaKnown RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 UQCC3Q6UW78 93 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 ZNF793Q6ZN11 406 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 UBE3DQ7Z6J8 389 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 FIBINQ8TAL6 211 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 NXPE3Q969Y0 559 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 MRPL48Q96GC5 212 aaKnown RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 A0A1B0GTH9 108 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 BCL2L11O43521 198 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 ICOSLGO75144 302 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 CTSAP10619 480 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 LTBQ06643 244 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 RNF44Q7L0R7 432 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 CPEB1Q9BZB8 566 aaKnown RBP13.93□□□□□ -0.18
PMS1-221ENST00000624204 FAM117AQ9C073 453 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 SLITRK2Q9H156 845 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 FAM96BQ9Y3D0 163 aa13.93□□□□□ -0.18
PMS1-221ENST00000624204 SZT2Q5T011 3432 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 TRAV18A0A075B6X5 111 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 ERI3O43414 337 aaKnown RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 LY86O95711 162 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 PPT1P50897 306 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 METAP1P53582 386 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 PSMD4P55036 377 aaKnown RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 ACTA2P62736 377 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 ACTG2P63267 376 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 SLC9A5Q14940 896 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 KCNRGQ8N5I3 272 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 CDS1Q92903 461 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 MIB2Q96AX9 1013 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 CNTNAP3BQ96NU0 1288 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms