RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ADAM19Q9H013 955 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 FGF20Q9NP95 211 aaPredicted RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 A0A0U1RQK1 487 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 FAM111BQ6SJ93 734 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 PNPLA1Q8N8W4 532 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 OR51S1Q8NGJ8 323 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 OR51Q1Q8NH59 317 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 RSC1A1Q92681 617 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 C16orf70Q9BSU1 422 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SEMA4CQ9C0C4 833 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 OR8D2Q9GZM6 311 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 ELOVL3Q9HB03 270 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 PATZ1Q9HBE1 687 aaKnown RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 TDP1Q9NUW8 608 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 MUTYHQ9UIF7 546 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 DKKL1Q9UK85 242 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 RAB22AQ9UL26 194 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 ZNF840PA6NDX5 716 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 VSTM2BA6NLU5 285 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SOCS6O14544 535 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 PLCXD2Q0VAA5 305 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 KIAA1958Q8N8K9 716 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 OR8D4Q8NGM9 314 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 OR5M8Q8NGP6 311 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 AKR7LQ8NHP1 331 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SPTSSAQ969W0 71 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 ST6GAL2Q96JF0 529 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 CMTM3Q96MX0 182 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 KCNIP1Q9NZI2 227 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 PRSS21Q9Y6M0 314 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 MEIKINA0A087WXM9 373 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 PLGP00747 810 aaPredicted RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 SSBP1Q04837 148 aaKnown RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 GDF6Q6KF10 455 aaPredicted RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 FBXW12Q6X9E4 464 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 DPY19L4Q7Z388 723 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 NKAIN3Q8N8D7 197 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 OR2AK2Q8NG84 335 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 HHIPL1Q96JK4 782 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SPACA1Q9HBV2 294 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 INSL5Q9Y5Q6 135 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 CLDN12P56749 244 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 GAB1Q13480 694 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 FAM71CQ8NEG0 241 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 DAZLQ92904 295 aaKnown RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 FN3KRPQ9HA64 309 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 C19orf25Q9UFG5 118 aaPredicted RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 ZNF860A6NHJ4 632 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 NUDT21O43809 227 aaKnown RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 FOLR1P15328 257 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 FOXK2Q01167 660 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 HSD17B13Q7Z5P4 300 aaPredicted RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 NLGN4XQ8N0W4 816 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 OR6S1Q8NH40 331 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 IRF7Q92985 503 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SLC41A2Q96JW4 573 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 ZNF251Q9BRH9 671 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 CSAG2Q9Y5P2 127 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 A0A1W2PPV4 95 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 TMEM235A6NFC5 223 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SCAF4O95104 1147 aaKnown RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 APBB3O95704 486 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 LGI1O95970 557 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 TACR3P29371 465 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 HOXA11P31270 313 aaPredicted RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 PLP2Q04941 152 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 RBM39Q14498 530 aaKnown RBP8.28□□□□□ -1.08
VCL-206ENST00000623461 C6orf132Q5T0Z8 1188 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 C1orf94Q6P1W5 598 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 TMPRSS9Q7Z410 1059 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SCD5Q86SK9 330 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 UPRTQ96BW1 309 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 MED20Q9H944 212 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 SLC25A19Q9HC21 320 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 CSNK1G1Q9HCP0 422 aa8.28□□□□□ -1.08
VCL-206ENST00000623461 WNK3Q9BYP7 1800 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 M0QZQ0 153 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 SMIM6P0DI80 62 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 CTRB1P17538 263 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 EPHA1P21709 976 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 F2RL1P55085 397 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 MALLQ13021 153 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 CNN3Q15417 329 aaKnown RBP8.27□□□□□ -1.08
VCL-206ENST00000623461 CTRB2Q6GPI1 263 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 ADGRE4PQ86SQ3 457 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 BAP18Q8IXM2 172 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 COMMD1Q8N668 190 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 FIBINQ8TAL6 211 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 FAM3DQ96BQ1 224 aa8.27□□□□□ -1.08
VCL-206ENST00000623461 CNOT4O95628 575 aaKnown RBP8.27□□□□□ -1.09
VCL-206ENST00000623461 EIF4EP06730 217 aaKnown RBP8.27□□□□□ -1.09
VCL-206ENST00000623461 OR13C7P0DN81 318 aa8.27□□□□□ -1.09
VCL-206ENST00000623461 FAM180BQ6P0A1 224 aa8.27□□□□□ -1.09
VCL-206ENST00000623461 CLEC9AQ6UXN8 241 aa8.27□□□□□ -1.09
VCL-206ENST00000623461 PRICKLE2Q7Z3G6 844 aa8.27□□□□□ -1.09
VCL-206ENST00000623461 CPNE4Q96A23 557 aaPredicted RBP8.27□□□□□ -1.09
VCL-206ENST00000623461 PTCHD1Q96NR3 888 aa8.27□□□□□ -1.09
VCL-206ENST00000623461 TXN2Q99757 166 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms