RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 FOXK2Q01167 660 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 TMED1Q13445 227 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF627Q7L945 461 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CCDC103Q8IW40 242 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 SULF2Q8IWU5 870 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 OR2M7Q8NG81 312 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 OR10D3Q8NH80 312 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 PPP1R35Q8TAP8 253 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 SCARF2Q96GP6 870 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CCDC120Q96HB5 630 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 DCLRE1CQ96SD1 692 aaKnown RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CHST11Q9NPF2 352 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 DCAF13Q9NV06 445 aaKnown RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 VNN3Q9NY84 501 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 GPR55Q9Y2T6 319 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CCDC168Q8NDH2 2452 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 USF3Q68DE3 2245 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 OR2M5A3KFT3 312 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 AGAP5A6NIR3 686 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF878C9JN71 531 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 SYT5O00445 386 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 LYZL6O75951 148 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 GADD45AP24522 165 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 GSTT1P30711 240 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 OR3A3P47888 321 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 OR3A2P47893 321 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CFHR1Q03591 330 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 MEDAGQ5VYS4 303 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF613Q6PF04 617 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CBLL1Q75N03 491 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF675Q8TD23 568 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM255BQ8WV15 326 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 SGCDQ92629 289 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 ABCB9Q9NP78 766 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 SLC22A11Q9NSA0 550 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 HDGFL3Q9Y3E1 203 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 MED12Q93074 2177 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 TRBV2A0A0J9YWF9 115 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 J3QRK9 145 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 PLOD2O00469 737 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CHP2O43745 196 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 GLSO94925 669 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 FCER2P06734 321 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 NPR2P20594 1047 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 CHN2P52757 468 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 HSF1Q00613 529 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 RELAQ04206 551 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 PRICKLE4Q2TBC4 344 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 TBPL2Q6SJ96 375 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 RBM45Q8IUH3 476 aaKnown RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 LINC00346Q8IVM7 164 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 GPALPP1Q8IXQ4 340 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 TAMM41Q96BW9 452 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 Q96M85 177 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 LMF1Q96S06 567 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 FAIMQ9NVQ4 179 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 SIDT1Q9NXL6 827 aaKnown RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 PDP2Q9P2J9 529 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 EXO1Q9UQ84 846 aaKnown RBP8.27□□□□□ -1.09
HDAC9-229ENST00000622668 NTNG1Q9Y2I2 539 aa8.27□□□□□ -1.09
HDAC9-229ENST00000622668 A0A1W2PS29 197 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 OR6C65A6NJZ3 312 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 ARL6IP5O75915 188 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 SBK3P0C264 359 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 OSMP13725 252 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 CFL1P23528 166 aaKnown RBP8.26□□□□□ -1.09
HDAC9-229ENST00000622668 OPRM1P35372 400 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 ZFP36L2P47974 494 aaKnown RBP8.26□□□□□ -1.09
HDAC9-229ENST00000622668 MLF1P58340 268 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 ACTC1P68032 377 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 ACTA1P68133 377 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 MZT1Q08AG7 82 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 KRTCAP3Q53RY4 240 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 TIPARPQ7Z3E1 657 aaKnown RBP8.26□□□□□ -1.09
HDAC9-229ENST00000622668 FBXL14Q8N1E6 418 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 ASCC1Q8N9N2 400 aaKnown RBP8.26□□□□□ -1.09
HDAC9-229ENST00000622668 NMD3Q96D46 503 aaKnown RBP8.26□□□□□ -1.09
HDAC9-229ENST00000622668 LRFN5Q96NI6 719 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 SPSB2Q99619 263 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 MICU1Q9BPX6 476 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 A4GALTQ9NPC4 353 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 CCM2LQ9NUG4 571 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-229ENST00000622668 OSGIN1Q9UJX0 560 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 NEUROG3Q9Y4Z2 214 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 PIKFYVEQ9Y2I7 2098 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 FAM230AA0A1W2PPH8 454 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 LRRN3E7EW58 273 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 IDH3BO43837 385 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 MT-ATP6P00846 226 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 CD14P08571 375 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 GPX2P18283 190 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 CASP3P42574 277 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 CD97P48960 835 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 DIO1P49895 249 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 SAXO2Q658L1 398 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 ANKRD16Q6P6B7 361 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 GDF7Q7Z4P5 450 aa8.26□□□□□ -1.09
HDAC9-229ENST00000622668 ABHD4Q8TB40 342 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms