RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 IL7P13232 177 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF136P52737 540 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 AADACL3Q5VUY0 350 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM71Q6P5X7 295 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 TBPL2Q6SJ96 375 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 S100A7AQ86SG5 101 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 CD163Q86VB7 1156 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 POC1BQ8TC44 478 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 NKX3-1Q99801 234 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-219ENST00000620786 BABAM2Q9NXR7 383 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 LRFN1Q9P244 771 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 CACNG2Q9Y698 323 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 BTBD17A6NE02 478 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 IDSB3KWA1 339 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 F5H5P2 479 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 SLC22A5O76082 557 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 AKR7A3O95154 331 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 PTGS2P35354 604 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 EPHA5P54756 1037 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 DPTQ07507 201 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 C1orf140Q5VVS0 124 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 SLC46A3Q7Z3Q1 461 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM255BQ8WV15 326 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 CNOT9Q92600 299 aaKnown RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 BIRC8Q96P09 236 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 C1QTNF6Q9BXI9 259 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 TFPTP0C1Z6 253 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 GLB1P16278 677 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 CD79BP40259 229 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 P2RX1P51575 399 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 F2RL1P55085 397 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 SLC10A1Q14973 349 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 HLA-BQ31612 363 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 LEXMQ3ZCV2 418 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 KHDC1LQ5JSQ8 128 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 STEAP3Q658P3 488 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 MFSD12Q6NUT3 480 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 RPL22L1Q6P5R6 122 aaKnown RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 GLB1L2Q8IW92 636 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 NMNAT3Q96T66 252 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 WDR76Q9H967 626 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 LANCL2Q9NS86 450 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 CORINQ9Y5Q5 1042 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM72A0PK05 275 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 LIPCP11150 499 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 HLA-DMAP28067 261 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 TRHRP34981 398 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 CCL7P80098 99 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 CATR1Q13166 79 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 VWA2Q5GFL6 755 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 GDPD1Q8N9F7 314 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF454Q8N9F8 522 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 CPEB3Q8NE35 698 aaKnown RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 MIB2Q96AX9 1013 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 DPCDQ9BVM2 203 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 SLAMF8Q9P0V8 285 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 ASB4Q9Y574 426 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 LRIT2A6NDA9 550 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 DSCR3O14972 297 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 LYRM1O43325 122 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 GABRB3P28472 473 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 PRKAR1BP31321 381 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 VEGFCP49767 419 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 RPS23P62266 143 aaKnown RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 MRPL58Q14197 206 aaKnown RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 MSMO1Q15800 293 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 SFRP5Q5T4F7 317 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 OR6F1Q8NGZ6 308 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 CCL4L1Q8NHW4 92 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 KCNE4Q8WWG9 221 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 MUL1Q969V5 352 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 M0R1B8 84 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 FOXD2O60548 495 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 SLC34A2O95436 690 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 UBE2NLQ5JXB2 153 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 COX20Q5RI15 118 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 SYT13Q7L8C5 426 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 CPEB2Q7Z5Q1 589 aaKnown RBP10.51□□□□□ -0.73
CLIP1-219ENST00000620786 WFDC8Q8IUA0 241 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 LINC01599Q8WXQ3 324 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 SGPP1Q9BX95 441 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 ANKRD19PQ9H560 264 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM165Q9HC07 324 aa10.51□□□□□ -0.73
CLIP1-219ENST00000620786 NAP1L6A6NFF2 107 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM212A6NML5 194 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 P2RY10O00398 339 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 BDKRB2P30411 391 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 APOBEC1P41238 236 aaKnown RBP10.5□□□□□ -0.73
CLIP1-219ENST00000620786 CCR2P41597 374 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 RAD52P43351 418 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 CAPZBP47756 277 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 Q6ZS52 159 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 ABHD4Q8TB40 342 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 CHTF18Q8WVB6 975 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 ELP4Q96EB1 424 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 STACQ99469 402 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM246Q9BRR3 403 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 ZPBPQ9BS86 351 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 OR51E2Q9H255 320 aa10.5□□□□□ -0.73
CLIP1-219ENST00000620786 PRDM4Q9UKN5 801 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms