RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 FOXK2Q01167 660 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 IKZF1Q13422 519 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 CACUL1Q86Y37 369 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ETFBKMTQ8IXQ9 262 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 CMTM8Q8IZV2 173 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 CCDC107Q8WV48 283 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 PPP1R1CQ8WVI7 109 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 HOXA2O43364 376 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 TMPRSS11DO60235 418 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 FBXO24O75426 580 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 EPCAMP16422 314 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 AKR1C4P17516 323 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 SKP2Q13309 424 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ALKBH1Q13686 389 aaKnown RBP9□□□□□ -0.97
TNFAIP3-210ENST00000620204 Q3ZCU0 254 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 GXYLT1Q4G148 440 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 OR52W1Q6IF63 320 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 USP53Q70EK8 1073 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 NUDT13Q86X67 352 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ARMC10Q8N2F6 343 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 RASGEF1AQ8N9B8 481 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 DCAF4L2Q8NA75 395 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 CAMKVQ8NCB2 501 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 FBXO22Q8NEZ5 403 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 OR51D1Q8NGF3 324 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ELP5Q8TE02 316 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 MEGF10Q96KG7 1140 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 PIGQQ9BRB3 760 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 TMPRSS13Q9BYE2 586 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 RANBP2P49792 3224 aaKnown RBP9□□□□□ -0.97
TNFAIP3-210ENST00000620204 A0A1W2PS29 197 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 RFPL4AA6NLU0 287 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 RHPN2P1A8MT19 583 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 RFPL4AL1F8VTS6 287 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ZNF432O94892 652 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 VNN2O95498 520 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 SERPINA5P05154 406 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 KLK3P07288 261 aaPredicted RBP9□□□□□ -0.97
TNFAIP3-210ENST00000620204 S100A2P29034 98 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 MC3RP41968 323 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ATP1B3P54709 279 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 SHC2P98077 582 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ELAVL1Q15717 326 aaKnown RBP9□□□□□ -0.97
TNFAIP3-210ENST00000620204 SGCAQ16586 387 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 HENMT1Q5T8I9 393 aaKnown RBP9□□□□□ -0.97
TNFAIP3-210ENST00000620204 KHDRBS2Q5VWX1 349 aaKnown RBP9□□□□□ -0.97
TNFAIP3-210ENST00000620204 OTPQ5XKR4 325 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 CHST9Q7L1S5 443 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 C7orf61Q8IZ16 206 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 OR9A1PQ8NGU1 263 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 CD300LFQ8TDQ1 290 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 DCUN1D4Q92564 292 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 INTS12Q96CB8 462 aaKnown RBP9□□□□□ -0.97
TNFAIP3-210ENST00000620204 HS6ST2Q96MM7 605 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 CLCC1Q96S66 551 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 AIF1LQ9BQI0 150 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 C1QTNF2Q9BXJ5 285 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ATG5Q9H1Y0 275 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 RHBGQ9H310 441 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 KCNK15Q9H427 330 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 GAREM1Q9H706 876 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 UFSP2Q9NUQ7 469 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 EXOGQ9Y2C4 368 aaKnown RBP9□□□□□ -0.97
TNFAIP3-210ENST00000620204 ATG4BQ9Y4P1 393 aa9□□□□□ -0.97
TNFAIP3-210ENST00000620204 TMEM82A0PJX8 343 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 GGT3PA6NGU5 568 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 RAB3DO95716 219 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 ACTL6AO96019 429 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 AK4P27144 223 aaPredicted RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 ADH6P28332 368 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 MPGP29372 298 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 MAPK8P45983 427 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 LTBQ06643 244 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 PDE7AQ13946 482 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 EIF2B1Q14232 305 aaKnown RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 OR2B11Q5JQS5 317 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 MRM1Q6IN84 353 aaKnown RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 ZNF761Q86XN6 746 aaPredicted RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 CBARPQ8N350 705 aaPredicted RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 OR56A3Q8NH54 315 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 MAFIPQ8WZ33 124 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 ZNF558Q96NG5 402 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 CASD1Q96PB1 797 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 C20orf141Q9NUB4 165 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 KCNK7Q9Y2U2 307 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 NOSIPQ9Y314 301 aaKnown RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 WDR45Q9Y484 360 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 DOCK6Q96HP0 2047 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 hCG_1809904A0A1W2PP81 198 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 A0A1W2PR64 198 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 A0A1W2PRV1 198 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 ANKRD20A5PA0PJZ0 165 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 MEX3AA1L020 520 aaKnown RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 ELOA3DA6NLF2 546 aaPredicted RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 ERI3O43414 337 aaKnown RBP8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 TXNDC12O95881 172 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 NME2P22392 152 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 ABCD3P28288 659 aa8.99□□□□□ -0.97
TNFAIP3-210ENST00000620204 GABRR2P28476 465 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms