RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 NRGNQ92686 78 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 KIFAP3Q92845 792 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 FGF11Q92914 225 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 EFHD2Q96C19 240 aaPredicted RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 ZNF707Q96C28 371 aaPredicted RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 ZNF641Q96N77 438 aaPredicted RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 OXGR1Q96P68 337 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 CLCC1Q96S66 551 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 CENPKQ9BS16 269 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 SLC35A5Q9BS91 424 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 MTG1Q9BT17 334 aaPredicted RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 RNF126Q9BV68 326 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 NAT10Q9H0A0 1025 aaKnown RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 OPN3Q9H1Y3 402 aaPredicted RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 NEUROG2Q9H2A3 272 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 RBKSQ9H477 322 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 NT5MQ9NPB1 228 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 B3GNT2Q9NY97 397 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 AHSPQ9NZD4 102 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 BFARQ9NZS9 450 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 PDP1Q9P0J1 537 aaPredicted RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 SPRR3Q9UBC9 169 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 WARS2Q9UGM6 360 aaKnown RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 KLHL21Q9UJP4 597 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 PITPNC1Q9UKF7 332 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 VANGL2Q9ULK5 521 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 STAP1Q9ULZ2 295 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 PACSIN2Q9UNF0 486 aaPredicted RBP1.68□□□□□ -2.14
TARDBP-220ENST00000618606 KCNIP3Q9Y2W7 256 aa1.68□□□□□ -2.14
TARDBP-220ENST00000618606 ARHGAP21Q5T5U3 1957 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 IGKV1D-8A0A087WSZ0 117 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 IQANK1A0A1B0GTG1 560 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 A0A1B0GWB2 263 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 ERICH4A6NGS2 130 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 TUBAL3A6NHL2 446 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 A8MXQ7 604 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 IDSB3KWA1 339 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 SUPT3HB4E1H0 165 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 K7ENP7 123 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 L7N2F9 121 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 CASC3O15234 703 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 MAGEB4O15481 346 aaPredicted RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 MBTPS2O43462 519 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 TOM1O60784 492 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 OR2J3O76001 311 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 STAMBPO95630 424 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 TSPAN13O95857 204 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 KRT14P02533 472 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 FTH1P02794 183 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 LGALS2P05162 132 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 MCF2P10911 925 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 ZNF43P17038 809 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 TNNI1P19237 187 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 VDAC1P21796 283 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 IGHV1-2P23083 117 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 ATP5C1P36542 298 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 CCT6AP40227 531 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 OPRD1P41143 372 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 PTGDSP41222 190 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 GYG1P46976 350 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 RPL29P47914 159 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 ACLYP53396 1101 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 PKNOX1P55347 436 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 EIF3EP60228 445 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 MRPS11P82912 194 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 IRF8Q02556 426 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 ASPHQ12797 758 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 SHHQ15465 462 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 TGFBIQ15582 683 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 ZNF77Q15935 545 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 LY6G6FQ5SQ64 297 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 RAET1LQ5VY80 246 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 OR52E8Q6IFG1 317 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 CCDC137Q6PK04 289 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 SASS6Q6UVJ0 657 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 LRRC31Q6UY01 552 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 Q6ZSR3 168 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 BZW1Q7L1Q6 419 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 TMCO2Q7Z6W1 182 aaPredicted RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 ERI1Q8IV48 349 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 H1FOOQ8IZA3 346 aaPredicted RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 C14orf178Q8N769 122 aaPredicted RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 CCDC26Q8TAB7 109 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 SLC22A8Q8TCC7 542 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 IL1F10Q8WWZ1 152 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 SRSF12Q8WXF0 261 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 UFD1Q92890 307 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 MCUR1Q96AQ8 359 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 KIAA1143Q96AT1 154 aaPredicted RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 CXorf40BQ96DE9 158 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 C16orf74Q96GX8 76 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 PKNOX2Q96KN3 472 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 KCNA7Q96RP8 456 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 CNN2Q99439 309 aaKnown RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 CHP1Q99653 195 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 KLHDC3Q9BQ90 382 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 TEKT3Q9BXF9 490 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 RNF167Q9H6Y7 350 aa1.67□□□□□ -2.14
TARDBP-220ENST00000618606 NHEJ1Q9H9Q4 299 aaPredicted RBP1.67□□□□□ -2.14
TARDBP-220ENST00000618606 THUMPD1Q9NXG2 353 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms