RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 NPFFR1Q9GZQ6 430 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 HIF3AQ9Y2N7 669 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NME7Q9Y5B8 376 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 MYOFQ9NZM1 2061 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 MDFIC2A0A1B0GVS7 189 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 GLOD5A6NK44 160 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 UBE2L6O14933 153 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SOX18P35713 384 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 MRGPREQ86SM8 312 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SLCO2A1Q92959 643 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SDCBP2Q9H190 292 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SPNS1Q9H2V7 528 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 UCK1Q9HA47 277 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 A0A0G2JPF8 293 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 LOC100289279A0A1B0GTE1 492 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 HNRNPCL3B7ZW38 293 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SGK494L7N484 410 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ADAM20O43506 726 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CCNKO75909 580 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 HNRNPCL4P0DMR1 293 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ATF6P18850 670 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PCSK6P29122 969 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 OR3A4PP47883 348 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NOVP48745 357 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZNF133P52736 654 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 GPR85P60893 370 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 LASP1Q14847 261 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 STEAP4Q687X5 459 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZNF787Q6DD87 383 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SUSD1Q6UWL2 747 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 OR6K3Q8NGY3 331 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 JOSD2Q8TAC2 188 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 RNASE6Q93091 150 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 MRPS24Q96EL2 167 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 RNF38Q9H0F5 515 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 DDX47Q9H0S4 455 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 TOR3AQ9H497 397 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 HDGFL3Q9Y3E1 203 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZNF337Q9Y3M9 751 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NPIPA5A0A0B4J1W7 369 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 A0A1B0GVC2 190 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PDHA2P29803 388 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SLCO1A2P46721 670 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SOX8P57073 446 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 FADDQ13158 208 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ARHGAP11BQ3KRB8 267 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ARL13AQ5H913 290 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 LINGO2Q7L985 606 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CENPVQ7Z7K6 275 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 ADGRG3Q86Y34 549 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 LILRB2Q8N423 598 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CCDC107Q8WV48 283 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 STARD4Q96DR4 205 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ABHD17AQ96GS6 310 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PITX2Q99697 317 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 GPR45Q9Y5Y3 372 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 DOCK8Q8NF50 2099 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 IGKV6D-41A0A0C4DH26 115 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 IQCF5A8MTL0 148 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 WNT9BO14905 357 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 VNN2O95498 520 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 TIA1P31483 386 aaKnown RBP eCLIP3.08□□□□□ -1.92
LPP-220ENST00000617246 GABRA3P34903 492 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 FAHD1Q6P587 224 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 GIMAP2Q9UG22 337 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 FOXN3O00409 490 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 FGF3P11487 239 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 PSME3P61289 254 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 FOXO1Q12778 655 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZNF789Q5FWF6 425 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 METTL2BQ6P1Q9 378 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 OR4M1Q8NGD0 313 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 GMPPAQ96IJ6 420 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 SLC41A2Q96JW4 573 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SPAG4Q9NPE6 437 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ANKRD10Q9NXR5 420 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ATG4BQ9Y4P1 393 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 HMGCLP35914 325 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ARSDP51689 593 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ERVK11-1P61568 191 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 DHRS2Q13268 280 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NKAIN2Q5VXU1 208 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 TMEM203Q969S6 136 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ACOXLQ9NUZ1 547 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SLC2A8Q9NY64 477 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CCDC167Q9P0B6 97 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PPIL1Q9Y3C6 166 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 DISC1C4P0D8 188 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 KLF10Q13118 480 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZNF750Q32MQ0 723 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 DCST2Q5T1A1 773 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SLC16A13Q7RTY0 426 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 C17orf78Q8N4C9 275 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CBR4Q8N4T8 237 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 OTUD7AQ8TE49 926 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 GXYLT2A0PJZ3 443 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 OR4A8P0C604 315 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 EXOSC7Q15024 291 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 TIGD3Q6B0B8 471 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms