RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 RCBTB2O95199 551 aa12.1□□□□□ -0.47
MSH6-214ENST00000616033 RPLP2P05387 115 aaKnown RBP12.1□□□□□ -0.47
MSH6-214ENST00000616033 ANXA2P07355 339 aaKnown RBP12.1□□□□□ -0.47
MSH6-214ENST00000616033 LCN6P62502 163 aa12.1□□□□□ -0.47
MSH6-214ENST00000616033 DYRK1AQ13627 763 aa12.1□□□□□ -0.47
MSH6-214ENST00000616033 FAM69AQ5T7M9 428 aa12.1□□□□□ -0.47
MSH6-214ENST00000616033 DMKNQ6E0U4 476 aaPredicted RBP12.1□□□□□ -0.47
MSH6-214ENST00000616033 CDH26Q8IXH8 852 aa12.1□□□□□ -0.47
MSH6-214ENST00000616033 WDR34Q96EX3 536 aa12.1□□□□□ -0.47
MSH6-214ENST00000616033 SRA1Q9HD15 236 aaKnown RBP12.1□□□□□ -0.47
MSH6-214ENST00000616033 MRPS30Q9NP92 439 aaKnown RBP12.1□□□□□ -0.47
MSH6-214ENST00000616033 CTSFQ9UBX1 484 aa12.1□□□□□ -0.47
MSH6-214ENST00000616033 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
MSH6-214ENST00000616033 IFITM5A6NNB3 132 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 PIN1P1O15428 100 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 YKT6O15498 198 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 CDC123O75794 336 aaPredicted RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 ACSM1Q08AH1 577 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 CDK5R1Q15078 307 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 OR7A5Q15622 319 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 SMAD2Q15796 467 aaKnown RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 GUCA2BQ16661 112 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TCEAL5Q5H9L2 206 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 FAM199XQ6PEV8 388 aaPredicted RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 RASGRP3Q8IV61 690 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 BEST3Q8N1M1 668 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 OR51D1Q8NGF3 324 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 CASTOR1Q8WTX7 329 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 AKAP7Q9P0M2 348 aaPredicted RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 V9GY05 133 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 WDR87Q6ZQQ6 2873 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TRAPPC13A5PLN9 417 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 ZNF705EA8MWA4 302 aaPredicted RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 BLOC1S5-TXNDC5H3BN57 136 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 GABARAPH6UMI1 98 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TGM5O43548 720 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 PRAMEF2O60811 474 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 PRAF2O60831 178 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 FARS2O95363 451 aaKnown RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 SERPINA3P01011 423 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 FGF2P09038 288 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 POMZP3Q6PJE2 187 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 MRGPREQ86SM8 312 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 COX18Q8N8Q8 333 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 OR2AK2Q8NG84 335 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 ZPLD1Q8TCW7 415 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 RASD2Q96D21 266 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TRMT2BQ96GJ1 504 aaKnown RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 ARHGDIGQ99819 225 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 OR52A5Q9H2C5 316 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 UNKLQ9H9P5 680 aaKnown RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 FAM86C1Q9NVL1 165 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 SAGE1Q9NXZ1 904 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TAS2R5Q9NYW4 299 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 OR5V1Q9UGF6 321 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 ZNF879B4DU55 563 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 GALR3O60755 368 aaPredicted RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 SC5DO75845 299 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 G0S2P27469 103 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TAS2R43P59537 309 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TAS2R20P59543 309 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 SRSF5Q13243 272 aaKnown RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 ZNF425Q6IV72 752 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 ZNF627Q7L945 461 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 C12orf45Q8N5I9 185 aaPredicted RBP12.09□□□□□ -0.47
MSH6-214ENST00000616033 TCEAL3Q969E4 200 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 ACTRT3Q9BYD9 372 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 CHRDQ9H2X0 955 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 TREM1Q9NP99 234 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 CMC2Q9NRP2 79 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 MED17Q9NVC6 651 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 SLC35A3Q9Y2D2 325 aa12.09□□□□□ -0.47
MSH6-214ENST00000616033 AGPAT2O15120 278 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 SOD2P04179 222 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 CD3DP04234 171 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 CD63P08962 238 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 FOSL2P15408 326 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 RAB13P51153 203 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 DEFB103AP81534 67 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 AMZ1Q400G9 498 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 ZNF626Q68DY1 528 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 GJD3Q8N144 294 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 GATSQ8NAP1 163 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 OR2L2Q8NH16 312 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 PAQR8Q8TEZ7 354 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 SMIM19Q96E16 107 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 RSPH9Q9H1X1 276 aaPredicted RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 MEPEQ9NQ76 525 aaPredicted RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 C2orf42Q9NWW7 574 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 ST6GALNAC2Q9UJ37 374 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 NOP16Q9Y3C1 178 aaKnown RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 MPDZO75970 2070 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 A0A0A6YYD5 115 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 F5H0A9 414 aaPredicted RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 LILRB5O75023 590 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms