RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 FAIM2Q9BWQ8 316 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 POLDIP3Q9BY77 421 aaKnown RBP8.1□□□□□ -1.11
VPS11-206ENST00000614944 SMURF1Q9HCE7 757 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 FAM118AQ9NWS6 357 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 PHF11Q9UIL8 331 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 MRTO4Q9UKD2 239 aaKnown RBP8.1□□□□□ -1.11
VPS11-206ENST00000614944 IGHV1OR21-1A0A087WYE8 117 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 LY6G6EA0A0G2JKS1 128 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 PLA2G10O15496 165 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 DUX1O43812 170 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 PNPP00491 289 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 HIST1H1TP22492 207 aaPredicted RBP8.1□□□□□ -1.11
VPS11-206ENST00000614944 SLC6A2P23975 617 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 CDKN2CP42773 168 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 RGS6P49758 472 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 DUSP3P51452 185 aaPredicted RBP8.1□□□□□ -1.11
VPS11-206ENST00000614944 C1orf61Q13536 156 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 PTGR1Q14914 329 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 TRIM40Q6P9F5 258 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 TBPL2Q6SJ96 375 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 FAM198BQ6UWH4 519 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 CXXC5Q7LFL8 322 aaKnown RBP8.1□□□□□ -1.11
VPS11-206ENST00000614944 CALHM3Q86XJ0 350 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 SPPL2CQ8IUH8 684 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 PLXDC1Q8IUK5 500 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 SCARB1Q8WTV0 552 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 TM9SF4Q92544 642 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 HGDQ93099 445 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 C3orf49Q96BT1 292 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 SAP130Q9H0E3 1048 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 CDCP1Q9H5V8 836 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 PUS1Q9Y606 427 aaKnown RBP eCLIP8.1□□□□□ -1.11
VPS11-206ENST00000614944 U3KQA8 63 aa8.1□□□□□ -1.11
VPS11-206ENST00000614944 GPR31O00270 319 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 LRP3O75074 770 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 TGFB1P01137 390 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 MT-ND2P03891 347 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 CSF3P09919 207 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 TACR1P25103 407 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 STOMP27105 288 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 LSSP48449 732 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 FAM53BQ14153 422 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 MED22Q15528 200 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 HLA-BQ31612 363 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 ZNF542PQ5EBM4 170 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 PAGE3Q5JUK9 113 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 ADNP2Q6IQ32 1131 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 SERPINA12Q8IW75 414 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 WFDC12Q8WWY7 111 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 PATE1Q8WXA2 126 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 SLC41A2Q96JW4 573 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 NLKQ9UBE8 527 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 ZNF282Q9UDV7 671 aaPredicted RBP8.09□□□□□ -1.11
VPS11-206ENST00000614944 C5orf42Q9H799 3197 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 C1orf226A1L170 272 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 FAM220BPB1ANY3 271 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 H3BMH7 237 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 RGS10O43665 173 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 PRAMEF10O60809 474 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 ONECUT2O95948 504 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 OR8U8P0C7N1 319 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 PPT1P50897 306 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 PCBP4P57723 403 aaKnown RBP8.09□□□□□ -1.11
VPS11-206ENST00000614944 BLOC1S1P78537 153 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 DCDP81605 110 aaKnown RBP8.09□□□□□ -1.11
VPS11-206ENST00000614944 ACSM1Q08AH1 577 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 MRPL49Q13405 166 aaKnown RBP8.09□□□□□ -1.11
VPS11-206ENST00000614944 VEZF1Q14119 521 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 FAM174BQ3ZCQ3 159 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 SPANXN4Q5MJ08 99 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 CPTPQ5TA50 214 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 LAIR2Q6ISS4 152 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 FAM131AQ6UXB0 335 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 AHSA2Q719I0 299 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 LINGO2Q7L985 606 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.09□□□□□ -1.11
VPS11-206ENST00000614944 SERPINA11Q86U17 422 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 PROSER1Q86XN7 944 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 MISPQ8IVT2 679 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 D2HGDHQ8N465 521 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 UXS1Q8NBZ7 420 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 OR1N1Q8NGS0 311 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 LIPHQ8WWY8 451 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 SLC39A7Q92504 469 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 MOAP1Q96BY2 351 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 MVB12AQ96EY5 273 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 PRO1933Q9H354 126 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 CCNB1IP1Q9NPC3 277 aa8.09□□□□□ -1.11
VPS11-206ENST00000614944 FEZF1A0PJY2 475 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 TMEM72A0PK05 275 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 GABRR3A8MPY1 467 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 TSPAN2O60636 221 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 CTSVO60911 334 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 DNAJB6O75190 326 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 RGS11O94810 467 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 HEXAP06865 529 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 ZNF44P15621 663 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 S100A2P29034 98 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 GZMMP51124 257 aa8.08□□□□□ -1.12
VPS11-206ENST00000614944 RAP1AP62834 184 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms