RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 LRRC75AQ8NAA5 344 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 SLC37A3Q8NCC5 494 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 OR4K17Q8NGC6 315 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 OR52E2Q8NGJ4 325 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 MOSPD2Q8NHP6 518 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PSMF1Q92530 271 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PTP4A1Q93096 173 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 DDIT4LQ96D03 193 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 FER1L6-AS2Q96M78 137 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PTDSS2Q9BVG9 487 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 FUNDC2Q9BWH2 189 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 YIPF3Q9GZM5 350 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 GPN2Q9H9Y4 310 aaPredicted RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 FGF20Q9NP95 211 aaPredicted RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ASCL3Q9NQ33 180 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 SERINC1Q9NRX5 453 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 CHCHD3Q9NX63 227 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 TEKT2Q9UIF3 430 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 FBXL2Q9UKC9 423 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PTPRBP23467 1997 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 CEP250Q9BV73 2442 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PCSK5Q92824 1860 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 A0A087WZY1 265 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 SLC22A31A6NKX4 558 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 IMPA2O14732 288 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PTHP01270 115 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 CD14P08571 375 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 HIST1H1CP16403 213 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 MYL12AP19105 171 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 FKBP2P26885 142 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 CTXN1P60606 82 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ERVK-25P63136 954 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 RPL18Q07020 188 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 FOXF1Q12946 379 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 AIMP2Q13155 320 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 CRMP1Q14194 572 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 INPP5JQ15735 1006 aaPredicted RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 SGCBQ16585 318 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 TIGD6Q17RP2 521 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 GXYLT1Q4G148 440 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 EMC4Q5J8M3 183 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 NIPAL3Q6P499 406 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 B3GNT6Q6ZMB0 384 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ZNF367Q7RTV3 350 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 IGFN1Q86VF2 1251 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ANKRD13BQ86YJ7 626 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 NANOGP1Q8N7R0 232 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 FAM98AQ8NCA5 519 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PROKR2Q8NFJ6 384 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 BBS1Q8NFJ9 593 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 OR1J4Q8NGS1 313 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 OR5J2Q8NH18 312 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 OR4K13Q8NH42 304 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 MFSD8Q8NHS3 518 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 POC1BQ8TC44 478 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 RAB2BQ8WUD1 216 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ZBTB8AQ96BR9 441 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 C12orf43Q96C57 262 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 SLC25A36Q96CQ1 311 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 YIPF6Q96EC8 236 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 C1GALT1C1Q96EU7 318 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 COG8Q96MW5 612 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 NPAS1Q99742 590 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 KATNB1Q9BVA0 655 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 MND1Q9BWT6 205 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ASPNQ9BXN1 380 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 POTEKPQ9BYX7 375 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 OR11A1Q9GZK7 315 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PROK2Q9HC23 129 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 TAS2R5Q9NYW4 299 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 STMN3Q9NZ72 180 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PTTG2Q9NZH5 202 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 EXOGQ9Y2C4 368 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 EXOSC1Q9Y3B2 195 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ADAM18Q9Y3Q7 739 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ALPK2Q86TB3 2170 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 MED13Q9UHV7 2174 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 M0R082 166 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 TXNDC12O95881 172 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 P04436 131 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 F13BP05160 661 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 LIPCP11150 499 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 LIFP15018 202 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 SLC2A5P22732 501 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 ATP6V1E1P36543 226 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 CYB561P49447 251 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 MED22Q15528 200 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 KLHL12Q53G59 568 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 ARMCX4Q5H9R4 360 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 NKAPLQ5M9Q1 402 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 SLC6A19Q695T7 634 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 TIGD3Q6B0B8 471 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 GPR139Q6DWJ6 353 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 FAM122BQ7Z309 247 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 MDGA2Q7Z553 956 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 BEST3Q8N1M1 668 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 CYB561A3Q8NBI2 242 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 PSD4Q8NDX1 1056 aa8.04□□□□□ -1.12
CCDC47-207ENST00000612558 TMEM41AQ96HV5 264 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms