RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 EGR4Q05215 589 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 TESK1Q15569 626 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 NPTX1Q15818 432 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 NCMAPQ5T1S8 102 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 TSPO2Q5TGU0 170 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 LRRC75A-AS1Q8N1F1 130 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 POU5F2Q8N7G0 328 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF611Q8N823 705 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 PIK3C3Q8NEB9 887 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF417Q8TAU3 575 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 ADAMTS16Q8TE57 1224 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 AKAP1Q92667 903 aaKnown RBP eCLIP10.87□□□□□ -0.67
CBWD3-208ENST00000612050 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF587Q96SQ5 575 aaPredicted RBP10.87□□□□□ -0.67
CBWD3-208ENST00000612050 SLC19A3Q9BZV2 496 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 OBP2BQ9NPH6 170 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 SLC7A10Q9NS82 523 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 NOX1Q9Y5S8 564 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 MYO9AB2RTY4 2548 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF726A6NNF4 738 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 FTCDNL1E5RQL4 147 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 SIAH2O43255 324 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 UMPSP11172 480 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 CD99P14209 185 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 CBLP22681 906 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 AHCYP23526 432 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 NUDT2P50583 147 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 NKX6-1P78426 367 aaPredicted RBP10.86□□□□□ -0.67
CBWD3-208ENST00000612050 C9orf135Q5VTT2 229 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 CARM1Q86X55 608 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 CALHM3Q86XJ0 350 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 MICU2Q8IYU8 434 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 OR6T1Q8NGN1 323 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 TAAR8Q969N4 342 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 GTPBP3Q969Y2 492 aaKnown RBP10.86□□□□□ -0.67
CBWD3-208ENST00000612050 TAMM41Q96BW9 452 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 TRMT61AQ96FX7 289 aaKnown RBP10.86□□□□□ -0.67
CBWD3-208ENST00000612050 TPD52L3Q96J77 140 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 MUS81Q96NY9 551 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF385AQ96PM9 386 aaKnown RBP10.86□□□□□ -0.67
CBWD3-208ENST00000612050 PTDSS2Q9BVG9 487 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 LINC00470Q9BZP3 86 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 FKRPQ9H9S5 495 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 NANSQ9NR45 359 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 SLC7A7Q9UM01 511 aa10.86□□□□□ -0.67
CBWD3-208ENST00000612050 M0R1B8 84 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 FXYD1O00168 92 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 ENTPD5O75356 428 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 BMP4P12644 408 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 LSP1P33241 339 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 KDELR2P33947 212 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 RPS4XP62701 263 aaKnown RBP10.85□□□□□ -0.67
CBWD3-208ENST00000612050 GNGT1P63211 74 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 BSPH1Q075Z2 132 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 PUDPQ08623 228 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 GABRA6Q16445 453 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 ADAM5Q6NVV9 412 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 SLC22A25Q6T423 547 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 DEF8Q6ZN54 512 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 C22orf34Q6ZV56 151 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 TGIF2LYQ8IUE0 185 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 ANKK1Q8NFD2 765 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 GPR32P1Q8NGA4 272 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 OR5J2Q8NH18 312 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 HS6ST2Q96MM7 605 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF583Q96ND8 569 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 TMEM204Q9BSN7 226 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 MRPL39Q9NYK5 338 aaKnown RBP10.85□□□□□ -0.67
CBWD3-208ENST00000612050 LRBAP50851 2863 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 FREM1Q5H8C1 2179 aa10.85□□□□□ -0.67
CBWD3-208ENST00000612050 LOC102725191A0A1B0GVB3 256 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ABCD4O14678 606 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 DCTN3O75935 186 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ITGA5P08648 1049 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ADORA3P0DMS8 318 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 THRBP10828 461 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 PRDX6P30041 224 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 RBM34P42696 430 aaKnown RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SELENOPP49908 381 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 GZMMP51124 257 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF83P51522 516 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SEC24CP53992 1094 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 CDH11P55287 796 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 POU3F1Q03052 451 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ST3GAL3Q11203 375 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 CYBRD1Q53TN4 286 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 HACD2Q6Y1H2 254 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 FKBP9P1Q75LS8 142 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 HDDC2Q7Z4H3 204 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 COMTD1Q86VU5 262 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 KDM8Q8N371 416 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 FAM162AQ96A26 154 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SLC41A3Q96GZ6 507 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ALKBH3Q96Q83 286 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 PCDHAC1Q9H158 963 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SLC17A5Q9NRA2 495 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SLC25A15Q9Y619 301 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 PDZD2O15018 2839 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 IGKV1D-42A0A075B6H8 117 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms