RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	ART5	Q96L15	291 aa		12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	VSTM2L	Q96N03	204 aa		12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	WAC	Q9BTA9	647 aa		12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	EDEM2	Q9BV94	578 aa		12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	MED28	Q9H204	178 aa		12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	OR51V1	Q9H2C8	321 aa		12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	TRIM36	Q9NQ86	728 aa		12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	PNO1	Q9NRX1	252 aa	Known RBP	12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	LANCL2	Q9NS86	450 aa		12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.69	□□□□□ -0.38
COPS7B-223	ENST00000611614	C7orf66	A4D0T2	115 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	SYNDIG1L	A6NDD5	238 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	PRAMEF2	O60811	474 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	ADAM11	O75078	769 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	PPP1R3D	O95685	299 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	ZNF3	P17036	446 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	SLC2A5	P22732	501 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	SLC6A6	P31641	620 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	GALNS	P34059	522 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	GPR176	Q14439	515 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	ZNF141	Q15928	474 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	VWA2	Q5GFL6	755 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	ALG10B	Q5I7T1	473 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	ZBTB37	Q5TC79	503 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	FCRLB	Q6BAA4	426 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	PWWP2B	Q6NUJ5	590 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	MED25	Q71SY5	747 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	ZNF550	Q7Z398	422 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	OAF	Q86UD1	273 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	LSM14A	Q8ND56	463 aa	Known RBP	12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	TNFRSF13C	Q96RJ3	184 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	MKL2	Q9ULH7	1088 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	LEUTX	A8MZ59	168 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	HRK	O00198	91 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	MT-ND5	P03915	603 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	EVI2B	P34910	448 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	SLC16A1	P53985	500 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	SNRPD2	P62316	118 aa	Known RBP	12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	DCD	P81605	110 aa	Known RBP	12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	MADCAM1	Q13477	382 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	FGFBP1	Q14512	234 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	TRAM1	Q15629	374 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	NSDHL	Q15738	373 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	LINC00114	Q6XXX2	140 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	IDO2	Q6ZQW0	420 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	NAXD	Q8IW45	347 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	PRSS58	Q8IYP2	241 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	OR5W2	Q8NH69	310 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	MCCC2	Q9HCC0	563 aa		12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	ELF5	Q9UKW6	265 aa	Predicted RBP	12.68	□□□□□ -0.38
COPS7B-223	ENST00000611614	C17orf105	B2RV13	164 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614		B8ZZF3	427 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	NGFR	P08138	427 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	SBK2	P0C263	348 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	PEPD	P12955	493 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	ELK1	P19419	428 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	STOM	P27105	288 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	NOS3	P29474	1203 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	PSMD4	P55036	377 aa	Known RBP	12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	ZFP36L1	Q07352	338 aa	Known RBP	12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	SPEM2	Q0P670	501 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	CRMP1	Q14194	572 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	NKAIN1	Q4KMZ8	207 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	ARHGAP11A	Q6P4F7	1023 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	NPSR1	Q6W5P4	371 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	SLC2A12	Q8TD20	617 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	G6PC3	Q9BUM1	346 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	ADGRL4	Q9HBW9	690 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	OCIAD1	Q9NX40	245 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	HAO2	Q9NYQ3	351 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	RPS6KB2	Q9UBS0	482 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	ERVK-19	Q9WJR5	959 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	DTX4	Q9Y2E6	619 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	AUP1	Q9Y679	476 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	CACNA1H	O95180	2353 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	NPIPB9	F8W1W9	429 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	CDX4	O14627	284 aa	Predicted RBP	12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	IFNG	P01579	166 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	MRPL3	P09001	348 aa	Known RBP	12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	AGFG1	P52594	562 aa	Known RBP	12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	FHL1	Q13642	323 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	CD276	Q5ZPR3	534 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	ULK3	Q6PHR2	472 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	HDDC2	Q7Z4H3	204 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	TMEM151B	Q8IW70	566 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	GPALPP1	Q8IXQ4	340 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	SMPDL3B	Q92485	455 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	SCMH1	Q96GD3	660 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	OR2M2	Q96R28	347 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	CDC6	Q99741	560 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	CMKLR1	Q99788	373 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614		Q9N2J8	555 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	PRODH2	Q9UF12	536 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	SLC23A1	Q9UHI7	598 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	NUBP2	Q9Y5Y2	271 aa		12.67	□□□□□ -0.38
COPS7B-223	ENST00000611614	WDFY4	Q6ZS81	3184 aa		12.66	□□□□□ -0.38
COPS7B-223	ENST00000611614	ASCC3	Q8N3C0	2202 aa	Known RBP	12.66	□□□□□ -0.38
COPS7B-223	ENST00000611614	ZSCAN5B	A6NJL1	495 aa		12.66	□□□□□ -0.38
COPS7B-223	ENST00000611614	DVL2	O14641	736 aa		12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms