RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PDCD5O14737 125 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 B3GALT2O43825 422 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 GPRIN2O60269 458 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 RP2O75695 350 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 NDUFB2O95178 105 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 SMIM10L1P0DMW3 83 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 ZNF35P13682 527 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 RPL4P36578 427 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 NDUFAF6Q330K2 333 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 DCAF12L2Q5VW00 463 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 KIRREL2Q6UWL6 708 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 STAC2Q6ZMT1 411 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 OR4N2Q8NGD1 307 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 OR4D10Q8NGI6 311 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 NT5CQ8TCD5 201 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 ZNF707Q96C28 371 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 SMIM10Q96HG1 83 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 OR2A5Q96R48 311 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 UTP23Q9BRU9 249 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 GPN1Q9HCN4 374 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 C14orf105Q9NVL8 296 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 DNAJB12Q9NXW2 375 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 TBC1D29Q9UFV1 150 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 FBXL2Q9UKC9 423 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 TICRRQ7Z2Z1 1910 aa13.84□□□□□ -0.19
PCDHGB1-202ENST00000611598 EML5Q05BV3 1969 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 ACOT7O00154 380 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 TOR1AO14656 332 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 SIGLEC5O15389 551 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 IL5P05113 134 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 CD1AP06126 327 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 GABRA1P14867 456 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 SIGLEC14Q08ET2 396 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 GAS6Q14393 721 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 CST6Q15828 149 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 EID2Q8N6I1 236 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 SCARB1Q8WTV0 552 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 ZDHHC1Q8WTX9 485 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 STACQ99469 402 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 TTYH1Q9H313 450 aaPredicted RBP13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 SLC17A4Q9Y2C5 497 aa13.83□□□□□ -0.19
PCDHGB1-202ENST00000611598 ATG2BQ96BY7 2078 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 A0A1B0GTH9 108 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 SNRPGP15A8MWD9 76 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 SULT1B1O43704 296 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 ITPKBP27987 946 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 MAP3K8P41279 467 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 ART1P52961 327 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 MAZP56270 477 aaKnown RBP13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 ERVK-25P63136 954 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 IL10RAQ13651 578 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 PRICKLE4Q2TBC4 344 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 C2orf27AQ580R0 203 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 TFAP2EQ6VUC0 442 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 DGAT2L6Q6ZPD8 337 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 C12orf76Q8N812 135 aaPredicted RBP13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 ZNF511Q8NB15 262 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 PNPLA2Q96AD5 504 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 Q96M85 177 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 TOX2Q96NM4 488 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 TSSK2Q96PF2 358 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 FGF22Q9HCT0 170 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 EXOSC3Q9NQT5 275 aaKnown RBP13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 ZC4H2Q9NQZ6 224 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 MED9Q9NWA0 146 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 PFDN2Q9UHV9 154 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 GPR160Q9UJ42 338 aa13.83□□□□□ -0.2
PCDHGB1-202ENST00000611598 IGKV1D-16P01601 117 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 OR8G3PP0DMU2 310 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 IGFALSP35858 605 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 MECP2P51608 486 aaKnown RBP13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 MGAT2Q10469 447 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 FAM78AQ5JUQ0 283 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 ATRAIDQ6UW56 229 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 SLC36A1Q7Z2H8 476 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 DND1Q8IYX4 353 aaKnown RBP13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 OR1S1Q8NH92 325 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 RPS4Y2Q8TD47 263 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 MIB2Q96AX9 1013 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 TM4SF19Q96DZ7 209 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 SGTBQ96EQ0 304 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 RNF208Q9H0X6 261 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 KIR3DX1Q9H7L2 352 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 RABL2AQ9UBK7 228 aaPredicted RBP13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 RABL2BQ9UNT1 228 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 KLHDC2Q9Y2U9 406 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 H0YC42 278 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 GOSR2O14653 212 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 IGF2P01344 180 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 RLN1P04808 185 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 FGF2P09038 288 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 RAB40ALP0C0E4 278 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 ILF3Q12906 894 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 PCGF3Q3KNV8 242 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 YOD1Q5VVQ6 348 aaPredicted RBP13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 VITQ6UXI7 678 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 MAMSTRQ6ZN01 415 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 TMPRSS12Q86WS5 348 aa13.82□□□□□ -0.2
PCDHGB1-202ENST00000611598 BVESQ8NE79 360 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms