RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, human

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-209	ENST00000604814	FAF1	Q9UNN5	650 aa	Predicted RBP	4.64	□□□□□ -1.67
TUBE1-209	ENST00000604814	TCF19	Q9Y242	345 aa		4.64	□□□□□ -1.67
TUBE1-209	ENST00000604814	POLR3H	Q9Y535	204 aa	Predicted RBP	4.64	□□□□□ -1.67
TUBE1-209	ENST00000604814	AUP1	Q9Y679	476 aa		4.64	□□□□□ -1.67
TUBE1-209	ENST00000604814	CDHR2	Q9BYE9	1310 aa		4.64	□□□□□ -1.67
TUBE1-209	ENST00000604814		A0A0A6YYD4	124 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	IGHV4-28	A0A0C4DH34	117 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TCRBV9S1A1T	A0A576	114 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TMEM114	B3SHH9	223 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814		E5RJQ4	531 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CLDN34	H7C241	214 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814		K7EN84	100 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TNFSF11	O14788	317 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	SIGLEC5	O15389	551 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	SGCE	O43556	437 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	XPNPEP2	O43895	674 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CIAO1	O76071	339 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	NADK	O95544	446 aa	Predicted RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	JCHAIN	P01591	159 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	RPS17	P08708	135 aa	Known RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	ITGA2	P17301	1181 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	RPL4	P36578	427 aa	Known RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	RANBP1	P43487	201 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	RWDD2B	P57060	319 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	VLDLR	P98155	873 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	C2orf80	Q0P641	193 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	DUSP7	Q16829	419 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	UPP1	Q16831	310 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TRMT5	Q32P41	509 aa	Known RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	ZNF672	Q499Z4	452 aa	Predicted RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	RFTN2	Q52LD8	501 aa	Predicted RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	SPANXN4	Q5MJ08	99 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FAHD1	Q6P587	224 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PARM1	Q6UWI2	310 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CD300LG	Q6UXG3	332 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	SLC25A48	Q6ZT89	311 aa	Known RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	ASB18	Q6ZVZ8	466 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	AMIGO2	Q86SJ2	522 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TMEM156	Q8N614	296 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CATSPER1	Q8NEC5	780 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	OR5T2	Q8NGG2	359 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	RNF133	Q8WVZ7	376 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TAAR1	Q96RJ0	339 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	MMP28	Q9H239	520 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FZD3	Q9NPG1	666 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PLEKHJ1	Q9NW61	149 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	GALP	Q9UBC7	116 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	B4GALT7	Q9UBV7	327 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	KCNIP3	Q9Y2W7	256 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	OR5H15	A6NDH6	313 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814		A8MX80	341 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TCP10L2	B9ZVM9	353 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814		H3BMQ9	156 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	IFNA2	P01563	188 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FABP1	P07148	127 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	RHOC	P08134	193 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	OCM2	P0CE71	109 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FGF3	P11487	239 aa	Predicted RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PRPS1L1	P21108	318 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	COIL	P38432	576 aa	Predicted RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	XCR1	P46094	333 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PRLHR	P49683	370 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	EMD	P50402	254 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PLK1	P53350	603 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CXCR4	P61073	352 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	BLOC1S1	P78537	153 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	MGAT3	Q09327	533 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	GPR17	Q13304	367 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	GTF2H2	Q13888	395 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PDK2	Q15119	407 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	ATP6V1F	Q16864	119 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	IMPG1	Q17R60	797 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TRIM16L	Q309B1	348 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PIGG	Q5H8A4	983 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CEP85L	Q5SZL2	805 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	IDNK	Q5T6J7	187 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	GTF2H2C	Q6P1K8	395 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CERS6	Q6ZMG9	384 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PIGZ	Q86VD9	579 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	DND1	Q8IYX4	353 aa	Known RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	PGAM4	Q8N0Y7	254 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	KIF2B	Q8N4N8	673 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	NEXN-AS1	Q8NBZ9	246 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	OR2L2	Q8NH16	312 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	OR5B3	Q8NH48	314 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CDS1	Q92903	461 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	STMN2	Q93045	179 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FAF2	Q96CS3	445 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FAHD2A	Q96GK7	314 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	ITCH	Q96J02	903 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	SORCS2	Q96PQ0	1159 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	MRI	Q9BWK5	157 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	CHRNA10	Q9GZZ6	450 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	KCNS2	Q9ULS6	477 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	FZD1	Q9UP38	647 aa		4.63	□□□□□ -1.67
TUBE1-209	ENST00000604814	TVP23A	A6NH52	213 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms