RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ZNF816-ZNF321PA0A0X1KG74 233 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 A0A1B0GX30 115 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 KCNK5O95279 499 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 P04436 131 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 VIPR2P41587 438 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 DAPP51397 102 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 WDR5P61964 334 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CDC20Q12834 499 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 KCTD11Q693B1 232 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF321PQ8N8H1 164 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 SHISA4Q96DD7 197 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 NEURL2Q9BR09 285 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 RBM24Q9BX46 236 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 SFXN1Q9H9B4 322 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 SDR39U1Q9NRG7 319 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 VAPAQ9P0L0 249 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 KIF25Q9UIL4 384 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ZNFX1Q9P2E3 1918 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 GABARAPO95166 117 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 GABRA5P31644 462 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 RAB11AP62491 216 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ADARB1P78563 741 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 SLC46A3Q7Z3Q1 461 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CPXM2Q8N436 756 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 IL22RA1Q8N6P7 574 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 HSD17B11Q8NBQ5 300 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 PLEKHJ1Q9NW61 149 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 KPTNQ9Y664 436 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ENPP4Q9Y6X5 453 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 GPR32O75388 356 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 OR52W1Q6IF63 320 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 SLC2A12Q8TD20 617 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 OR5B2Q96R09 309 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 DMRT3Q9NQL9 472 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 HMGCLP35914 325 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CMTM1Q8IZ96 169 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 TTC9BQ8N6N2 239 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CHST14Q8NCH0 376 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CNOT2Q9NZN8 540 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 FOXK1P85037 733 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 HOXC5Q00444 222 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 MOB1BQ7L9L4 216 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM151BQ8IW70 566 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 LRIG1Q96JA1 1093 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CA14Q9ULX7 337 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 IER3IP1Q9Y5U9 82 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 KDM4FA0A1W2PPD8 638 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 HTR6P50406 440 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 PTTG1IPP53801 180 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 UBE2NP61088 152 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 RGNQ15493 299 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CLEC12BQ2HXU8 276 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 PRSS45Q7RTY3 260 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 MAML2Q8IZL2 1156 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ACTL6BO94805 426 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 TPOP07202 933 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 HSF1Q00613 529 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 DLX2Q07687 328 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 LIPIQ6XZB0 460 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM217Q8N7C4 229 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 OR14L1PQ8NHC6 308 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 TRMT2BQ96GJ1 504 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF286AQ9HBT8 521 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 STARD5Q9NSY2 213 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 C17orf113A0A1B0GUU1 675 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CEBPZOSA8MTT3 80 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 J3KTA2 159 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 P2RX6O15547 441 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CALCRP30988 508 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 SDHAP31040 664 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 SLC1A3P43003 542 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 UBE2MP61081 183 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 RAB35Q15286 201 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 C1orf220Q5T0J3 134 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 NDUFAF7Q7L592 441 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 MAVSQ7Z434 540 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF629Q9UEG4 869 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 V9GY05 133 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 AP1G1O43747 822 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SERPINA5P05154 406 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 RAB13P51153 203 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 HBMQ6B0K9 141 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 BCDIN3DQ7Z5W3 292 aaKnown RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 FAM71F1Q96KD3 344 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 MCOLN1Q9GZU1 580 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 GJE1A6NN92 205 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SGK494L7N484 410 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF91Q05481 1191 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 CST6Q15828 149 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 C3orf30Q96M34 536 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF251Q9BRH9 671 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 C16orf70Q9BSU1 422 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SLC17A9Q9BYT1 436 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 FBXO7Q9Y3I1 522 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 GP2P55259 537 aaKnown RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 RAB31Q13636 194 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 LEXMQ3ZCV2 418 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 PRR22Q8IZ63 422 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 OR5AR1Q8NGP9 310 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms