RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SGCDQ92629 289 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 SCMH1Q96GD3 660 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 RHNO1Q9BSD3 238 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 HINT3Q9NQE9 182 aaKnown RBP16.2■□□□□ 0.18
VRK3-225ENST00000601912 INIPQ9NRY2 104 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 FKBP14Q9NWM8 211 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 GRHPRQ9UBQ7 328 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 TRAPPC4Q9Y296 219 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 B3GALT5Q9Y2C3 310 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 C11orf98E9PRG8 122 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 LINC01387J3KSC0 135 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 RRP8O43159 456 aaKnown RBP16.19■□□□□ 0.18
VRK3-225ENST00000601912 DBTP11182 482 aaKnown RBP16.19■□□□□ 0.18
VRK3-225ENST00000601912 PIPP12273 146 aaPredicted RBP16.19■□□□□ 0.18
VRK3-225ENST00000601912 HIST1H1CP16403 213 aaKnown RBP16.19■□□□□ 0.18
VRK3-225ENST00000601912 SDHAP31040 664 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 MEOX1P50221 254 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 CDH11P55287 796 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 OR2B6P58173 313 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 TLE3Q04726 772 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 ITGADQ13349 1161 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 EMC4Q5J8M3 183 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 AADACL4Q5VUY2 407 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 GPR139Q6DWJ6 353 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 KCTD8Q6ZWB6 473 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 SPARTQ8N0X7 666 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 OR4K13Q8NH42 304 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 SFXN2Q96NB2 322 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 TTTY12Q9BZ98 90 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 ZNF703Q9H7S9 590 aaPredicted RBP16.19■□□□□ 0.18
VRK3-225ENST00000601912 CHST11Q9NPF2 352 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 SEC14L4Q9UDX3 406 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
VRK3-225ENST00000601912 A0A1W2PNR3 127 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 IRGMA1A4Y4 181 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 FAM183AA6NL82 134 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SULT2B1O00204 365 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 CDK1P06493 297 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 HTR1AP08908 422 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SLC15A1P46059 708 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 B3GALT5-AS1P59052 145 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SLC35A1P78382 337 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 ZNF91Q05481 1191 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.18■□□□□ 0.18
VRK3-225ENST00000601912 PUDPQ08623 228 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 ST3GAL4Q11206 333 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 ZP4Q12836 540 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 KLHL22Q53GT1 634 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 ZNF362Q5T0B9 420 aaPredicted RBP16.18■□□□□ 0.18
VRK3-225ENST00000601912 TMPPEQ6ZT21 453 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 JAZF1Q86VZ6 243 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SPACA3Q8IXA5 215 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SVOPQ8N4V2 548 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 TM9SF4Q92544 642 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SMAD5Q99717 465 aaKnown RBP16.18■□□□□ 0.18
VRK3-225ENST00000601912 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 AKAP13Q12802 2813 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 TEX13CA0A0J9YWL9 993 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 DPPA5A6NC42 116 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 FZD7O75084 574 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 PMS2P2O95744 297 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 TXNDC12O95881 172 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 HPNP05981 417 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SHC1P29353 583 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 EIF2S3P41091 472 aaKnown RBP16.18■□□□□ 0.18
VRK3-225ENST00000601912 MTNR1AP48039 350 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 DIO1P49895 249 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 CRMP1Q14194 572 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 HYAL4Q2M3T9 481 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 WIPI1Q5MNZ9 446 aaPredicted RBP16.18■□□□□ 0.18
VRK3-225ENST00000601912 FAM122BQ7Z309 247 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SLC22A16Q86VW1 577 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 ZFP62Q8NB50 900 aaPredicted RBP16.18■□□□□ 0.18
VRK3-225ENST00000601912 SLC37A3Q8NCC5 494 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SDR9C7Q8NEX9 313 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 SMPDL3BQ92485 455 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 MIB2Q96AX9 1013 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 Q96M85 177 aa16.18■□□□□ 0.18
VRK3-225ENST00000601912 TRAV17A0A0B4J275 112 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 A0A1W2PRG6 482 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 SERPINI2O75830 405 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 AKR7A3O95154 331 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 HTR1FP30939 366 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 RFC3P40938 356 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 ID4P47928 161 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 CSNK2A1P68400 391 aaPredicted RBP16.17■□□□□ 0.18
VRK3-225ENST00000601912 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.17■□□□□ 0.18
VRK3-225ENST00000601912 CYB561A3Q8NBI2 242 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 LSM14AQ8ND56 463 aaKnown RBP16.17■□□□□ 0.18
VRK3-225ENST00000601912 ADPRHL1Q8NDY3 354 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 SLC39A7Q92504 469 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 PTP4A1Q93096 173 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 RASD2Q96D21 266 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 KLHL15Q96M94 604 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 QPCTLQ9NXS2 382 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 PCDHGB1Q9Y5G3 927 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 PIEZO1Q92508 2521 aa16.17■□□□□ 0.18
VRK3-225ENST00000601912 FAM166BA8MTA8 275 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 MS4A18H0YCH9 400 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 ACOT7O00154 380 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms