RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	LRRC75A-AS1	Q8N1F1	130 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	ADPRHL1	Q8NDY3	354 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	WFDC11	Q8NEX6	87 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	OR52N5	Q8NH56	324 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	SLC26A7	Q8TE54	656 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	RASSF5	Q8WWW0	418 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	NEUROG1	Q92886	237 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	SLC41A3	Q96GZ6	507 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	OXGR1	Q96P68	337 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	EPYC	Q99645	322 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	TMEM43	Q9BTV4	400 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948	B3GALT5	Q9Y2C3	310 aa		13.6	□□□□□ -0.23
PLD3-223	ENST00000600948		A0A1W2PR80	420 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	CPSF4L	A6NMK7	179 aa	Known RBP	13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	FAM220BP	B1ANY3	271 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	CHP2	O43745	196 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	NKX6-1	P78426	367 aa	Predicted RBP	13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	TGFBR3	Q03167	851 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	LGALS3BP	Q08380	585 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	VEZF1	Q14119	521 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	MFSD13A	Q14CX5	517 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	ENTPD8	Q5MY95	495 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	NIPAL3	Q6P499	406 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	ERICH5	Q6P6B1	374 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	WDR88	Q6ZMY6	472 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	H1FNT	Q75WM6	255 aa	Predicted RBP	13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	LINGO2	Q7L985	606 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	C17orf78	Q8N4C9	275 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	WDR31	Q8NA23	367 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	KBTBD8	Q8NFY9	601 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	RP9	Q8TA86	221 aa	Known RBP	13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	MOGAT1	Q96PD6	335 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	PCDHAC1	Q9H158	963 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	SLC17A5	Q9NRA2	495 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	RCE1	Q9Y256	329 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	CORIN	Q9Y5Q5	1042 aa		13.59	□□□□□ -0.23
PLD3-223	ENST00000600948	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.58	□□□□□ -0.23
PLD3-223	ENST00000600948	LOC102725191	A0A1B0GVB3	256 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	TRAPPC13	A5PLN9	417 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	OR6C65	A6NJZ3	312 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	SHISA9	B4DS77	424 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	TRAF3IP2	O43734	574 aa	Predicted RBP	13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	CCDC22	O60826	627 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	ZNF432	O94892	652 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	COX4I1	P13073	169 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	ZNF43	P17038	809 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	ZNF83	P51522	516 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	CLDN17	P56750	224 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	SLC25A3	Q00325	362 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	ZNF672	Q499Z4	452 aa	Predicted RBP	13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	SHE	Q5VZ18	495 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	SPATA21	Q7Z572	469 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	TREML1	Q86YW5	311 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	ADAMTS16	Q8TE57	1224 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	FBXW5	Q969U6	566 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	BOD1	Q96IK1	185 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	GSX2	Q9BZM3	304 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	LINC00470	Q9BZP3	86 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	DLL4	Q9NR61	685 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	CMTM6	Q9NX76	183 aa		13.58	□□□□□ -0.24
PLD3-223	ENST00000600948	ZNF587B	E7ETH6	402 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	LRRN3	E7EW58	273 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	MS4A18	H0YCH9	400 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	ABCD4	O14678	606 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	TMCC2	O75069	709 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	UPK3A	O75631	287 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	HPR	P00739	348 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	DANCR	P0C864	163 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	SEC24C	P53992	1094 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	C1D	Q13901	141 aa	Known RBP	13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	MS4A18	Q3C1V0	323 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948		Q5PR19	223 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	TMEM108	Q6UXF1	575 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	CARM1	Q86X55	608 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	MICU2	Q8IYU8	434 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	SCAI	Q8N9R8	606 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	OR2T12	Q8NG77	320 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	TMEM171	Q8WVE6	324 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	PROX1	Q92786	737 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	PERP	Q96FX8	193 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	ELAC2	Q9BQ52	826 aa	Known RBP	13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	ZNF426	Q9BUY5	554 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	ASPN	Q9BXN1	380 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	MRPL39	Q9NYK5	338 aa	Known RBP	13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	BAG5	Q9UL15	447 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	SLC7A7	Q9UM01	511 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	AMDHD2	Q9Y303	409 aa		13.57	□□□□□ -0.24
PLD3-223	ENST00000600948	ARHGEF9	O43307	516 aa		13.56	□□□□□ -0.24
PLD3-223	ENST00000600948	KRT33A	O76009	404 aa		13.56	□□□□□ -0.24
PLD3-223	ENST00000600948	MT-ATP6	P00846	226 aa		13.56	□□□□□ -0.24
PLD3-223	ENST00000600948	SOD3	P08294	240 aa		13.56	□□□□□ -0.24
PLD3-223	ENST00000600948	NQO1	P15559	274 aa	Known RBP	13.56	□□□□□ -0.24
PLD3-223	ENST00000600948	PAX1	P15863	534 aa		13.56	□□□□□ -0.24
PLD3-223	ENST00000600948	CDH2	P19022	906 aa	Predicted RBP	13.56	□□□□□ -0.24
PLD3-223	ENST00000600948	TNFRSF1B	P20333	461 aa		13.56	□□□□□ -0.24
PLD3-223	ENST00000600948	PTAFR	P25105	342 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms