RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	FAHD1	Q6P587	224 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	SLC46A3	Q7Z3Q1	461 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	MEX3D	Q86XN8	651 aa	Known RBP	19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	C9orf106	Q8NAJ2	232 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	LIPH	Q8WWY8	451 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	OSTF1	Q92882	214 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	UCK2	Q9BZX2	261 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	SMURF2	Q9HAU4	748 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	USE1	Q9NZ43	259 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	POFUT2	Q9Y2G5	429 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	ZNF175	Q9Y473	711 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	MED12L	Q86YW9	2145 aa		19.63	■□□□□ 0.73
LTBP4-227	ENST00000600026	SLC22A20	A6NK97	555 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	FTCDNL1	E5RQL4	147 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	LRRN3	E7EW58	273 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	SOCS2	O14508	198 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	EI24	O14681	340 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	DNPH1	O43598	174 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	EIF1B	O60739	113 aa	Known RBP	19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	TGM6	O95932	706 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	HPR	P00739	348 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	GRPR	P30550	384 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	DAP	P51397	102 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	ALDH3A2	P51648	485 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	PER3	P56645	1201 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	RAC3	P60763	192 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	IL1RL1	Q01638	556 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	LTB	Q06643	244 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	PMPCA	Q10713	525 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	SNCB	Q16143	134 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	ZNF239	Q16600	458 aa	Known RBP	19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	ANKDD1A	Q495B1	522 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	P4HA3	Q7Z4N8	544 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	OAF	Q86UD1	273 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	PACRGL	Q8N7B6	248 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	FNDC9	Q8TBE3	224 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	MAGEE2	Q8TD90	523 aa	Predicted RBP	19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	CPNE4	Q96A23	557 aa	Predicted RBP	19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	MOGAT1	Q96PD6	335 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	NIPSNAP1	Q9BPW8	284 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	NAA11	Q9BSU3	229 aa	Predicted RBP	19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	KRT84	Q9NSB2	600 aa		19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	MCTS1	Q9ULC4	181 aa	Known RBP	19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	UBR5	O95071	2799 aa	Predicted RBP	19.62	■□□□□ 0.73
LTBP4-227	ENST00000600026	KLF4	O43474	513 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	TOX	O94900	526 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	SYNGR4	O95473	234 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	IGFBP5	P24593	272 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	PPP2R2B	Q00005	443 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	RIPPLY2	Q5TAB7	128 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	KDM4D	Q6B0I6	523 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	CD300LD	Q6UXZ3	194 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	NANOGNB	Q7Z5D8	188 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	SCAI	Q8N9R8	606 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	OR5J2	Q8NH18	312 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	WNT2B	Q93097	391 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	SLC29A1	Q99808	456 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	NDEL1	Q9GZM8	345 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	PAPOLB	Q9NRJ5	636 aa	Known RBP	19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	ENOPH1	Q9UHY7	261 aa		19.61	■□□□□ 0.73
LTBP4-227	ENST00000600026	CLEC18A	A5D8T8	446 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	CDC42EP2	O14613	210 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	AGFG2	O95081	481 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	OR6A2	O95222	327 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	ASAH2B	P0C7U1	165 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	CDH2	P19022	906 aa	Predicted RBP	19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	TIMP3	P35625	211 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	PTDSS1	P48651	473 aa	Known RBP	19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	RAD23A	P54725	363 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	PMS2P3	Q13401	168 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	ZBED5	Q49AG3	693 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	ANKRD34A	Q69YU3	496 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	CLEC18B	Q6UXF7	455 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	RASSF6	Q6ZTQ3	369 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	GALNT4	Q8N4A0	578 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	FAM26E	Q8N5C1	309 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	LRRC17	Q8N6Y2	441 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	CLEC18C	Q8NCF0	446 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	OR13C2	Q8NGS9	318 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	RND1	Q92730	232 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	GPA33	Q99795	319 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	PRRG4	Q9BZD6	226 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	CHST11	Q9NPF2	352 aa		19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026	MRPL39	Q9NYK5	338 aa	Known RBP	19.6	■□□□□ 0.73
LTBP4-227	ENST00000600026		M0R082	166 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	ZG16	O60844	167 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	FZD7	O75084	574 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	AQP8	O94778	261 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	RCBTB2	O95199	551 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	ALPL	P05186	524 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	FCGR2A	P12318	317 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	ENPP1	P22413	925 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	RFX4	Q33E94	735 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	RPL13AP3	Q6NVV1	102 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	PAQR6	Q6TCH4	344 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	KLHL17	Q6TDP4	642 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	H1FNT	Q75WM6	255 aa	Predicted RBP	19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	NAXE	Q8NCW5	288 aa		19.59	■□□□□ 0.73
LTBP4-227	ENST00000600026	OR51A7	Q8NH64	312 aa		19.59	■□□□□ 0.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms