RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 GPR32P1Q8NGA4 272 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 VANGL1Q8TAA9 524 aaPredicted RBP12.18□□□□□ -0.46
IRF3-225ENST00000600022 POC1BQ8TC44 478 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 TMEM171Q8WVE6 324 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 ROBO4Q8WZ75 1007 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 AKAP1Q92667 903 aaKnown RBP eCLIP12.18□□□□□ -0.46
IRF3-225ENST00000600022 SLC29A1Q99808 456 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 RSPO3Q9BXY4 272 aaPredicted RBP12.18□□□□□ -0.46
IRF3-225ENST00000600022 PRRG4Q9BZD6 226 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 ACTR6Q9GZN1 396 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 HOXD1Q9GZZ0 328 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 QRSL1Q9H0R6 528 aaKnown RBP12.18□□□□□ -0.46
IRF3-225ENST00000600022 C12orf49Q9H741 205 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 ZNF556Q9HAH1 456 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 USE1Q9NZ43 259 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 MKLN1Q9UL63 735 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 LAMP3Q9UQV4 416 aa12.18□□□□□ -0.46
IRF3-225ENST00000600022 ZNF443Q9Y2A4 671 aaPredicted RBP12.18□□□□□ -0.46
IRF3-225ENST00000600022 CENPVL1A0A0U1RR11 272 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 TNFSF11O14788 317 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 HS3ST1O14792 307 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 DENRO43583 198 aaKnown RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 EFNA2O43921 213 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 SS18L1O75177 396 aaPredicted RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 NDUFS7O75251 213 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 UGT2B17O75795 530 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 DIRAS1O95057 198 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 LGI1O95970 557 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 SOD3P08294 240 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 THRBP10828 461 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 TNFRSF1BP20333 461 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 CDH12P55289 794 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 RGS8P57771 180 aaPredicted RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 RPS3AP61247 264 aaKnown RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 C17orf67Q0P5P2 114 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 GANABQ14697 944 aaKnown RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 GLYR1Q49A26 553 aaPredicted RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 RNF220Q5VTB9 566 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 RANBP3LQ86VV4 465 aaPredicted RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 LINC00471Q8N535 108 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 ZNF611Q8N823 705 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 ATG16L2Q8NAA4 619 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 ZNF527Q8NB42 609 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 OR6K3Q8NGY3 331 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 GIPC3Q8TF64 312 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 CYGBQ8WWM9 190 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 ZNF524Q96C55 264 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 NR1H4Q96RI1 486 aaPredicted RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 FNDC11Q9BVV2 318 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 TBL1XR1Q9BZK7 514 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 AMBRA1Q9C0C7 1298 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 GABARAPL1Q9H0R8 117 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 PDP1Q9P0J1 537 aaPredicted RBP12.17□□□□□ -0.46
IRF3-225ENST00000600022 ENOPH1Q9UHY7 261 aa12.17□□□□□ -0.46
IRF3-225ENST00000600022 LINC01387J3KSC0 135 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 OIP5O43482 229 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 PLGP00747 810 aaPredicted RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 H1F0P07305 194 aaKnown RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 NGFRP08138 427 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 RPSAP08865 295 aaKnown RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 HPGDP15428 266 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 IGFBP5P24593 272 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 CTBP2P56545 445 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 MERTKQ12866 999 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 ZNF141Q15928 474 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 IQCCQ4KMZ1 466 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 C6orf52Q5T4I8 152 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 TTC23Q5W5X9 447 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 KRT80Q6KB66 452 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 ZNF836Q6ZNA1 936 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 NUFIP2Q7Z417 695 aaKnown RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 COMTD1Q86VU5 262 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 LSRQ86X29 649 aaPredicted RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 VRK2Q86Y07 508 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 SPATA3Q8NHX4 192 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 ZG16BQ96DA0 208 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 SH3YL1Q96HL8 342 aaPredicted RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 GMPPAQ96IJ6 420 aaPredicted RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 ARHGDIGQ99819 225 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 ADI1Q9BV57 179 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 REPIN1Q9BWE0 567 aaKnown RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.16□□□□□ -0.46
IRF3-225ENST00000600022 KCNE5Q9UJ90 142 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 EMC9Q9Y3B6 208 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 CHST2Q9Y4C5 530 aa12.16□□□□□ -0.46
IRF3-225ENST00000600022 ABCA1O95477 2261 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 NPIPA5A0A0B4J1W7 369 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 NPIPA7E9PJI5 369 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 H0YAE9 185 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 M0R3H8 397 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 OVOL3O00110 214 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 CCNB2O95067 398 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 OXSR1O95747 527 aaPredicted RBP12.15□□□□□ -0.46
IRF3-225ENST00000600022 ALPLP05186 524 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 NPIPA8P0DM63 369 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 ANXA8P13928 327 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 PTNP21246 168 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 CDKN1AP38936 164 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 YAP1P46937 504 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms