RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 C1QTNF12Q5T7M4 302 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 ANKRD16Q6P6B7 361 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 STK35Q8TDR2 534 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 MSI2Q96DH6 328 aaKnown RBP9.15□□□□□ -0.94
LSM4-205ENST00000597776 KTI12Q96EK9 354 aaPredicted RBP9.15□□□□□ -0.94
LSM4-205ENST00000597776 ITCHQ96J02 903 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 MAELQ96JY0 434 aaKnown RBP9.15□□□□□ -0.94
LSM4-205ENST00000597776 OR52B2Q96RD2 323 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 PIF1Q9H611 641 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 CACYBPQ9HB71 228 aaKnown RBP9.15□□□□□ -0.94
LSM4-205ENST00000597776 SDR39U1Q9NRG7 319 aaPredicted RBP9.15□□□□□ -0.94
LSM4-205ENST00000597776 CRNNQ9UBG3 495 aaPredicted RBP9.15□□□□□ -0.94
LSM4-205ENST00000597776 LPAR3Q9UBY5 353 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 ZNF232Q9UNY5 417 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 RASD1Q9Y272 281 aa9.15□□□□□ -0.94
LSM4-205ENST00000597776 A0A0G2JPF8 293 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 LOC100289279A0A1B0GTE1 492 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 ZNF503-AS2A6NEH8 195 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 HNRNPCL2B2RXH8 293 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 HNRNPCL3B7ZW38 293 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 NDUFS8O00217 210 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 HNRNPCL1O60812 293 aaKnown RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 SEC14L2O76054 403 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 IGLV1-44P01699 117 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 HNRNPCL4P0DMR1 293 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 SRD5A1P18405 259 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 GTF2E2P29084 291 aaKnown RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 IDH3GP51553 393 aaPredicted RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 POLR2JP52435 117 aaKnown RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 ARF1P84077 181 aaKnown RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 HGFACQ04756 655 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 IQCCQ4KMZ1 466 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 ZNF311Q5JNZ3 666 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 FAM120AOSQ5T036 256 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 FAM166AQ6J272 317 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 SLC2A7Q6PXP3 512 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 COMTD1Q86VU5 262 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 ZCCHC24Q8N2G6 241 aaKnown RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 MFSD8Q8NHS3 518 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 MAGEE2Q8TD90 523 aaPredicted RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 ZNF837Q96EG3 531 aaPredicted RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 SOX7Q9BT81 388 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 RSPO3Q9BXY4 272 aaPredicted RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 LINC00470Q9BZP3 86 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 BPESC1Q9GZL8 116 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 PAIP1Q9H074 479 aaKnown RBP9.14□□□□□ -0.95
LSM4-205ENST00000597776 PLK3Q9H4B4 646 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 RMND5AQ9H871 391 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 ZIM2Q9NZV7 527 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 B3GAT1Q9P2W7 334 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 KCNS2Q9ULS6 477 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 PCDHB14Q9Y5E9 798 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 ANK2Q01484 3957 aa9.14□□□□□ -0.95
LSM4-205ENST00000597776 MALRD1Q5VYJ5 2156 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 IGKV1D-42A0A075B6H8 117 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 A0A096LPI6 279 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 LOC390937A0A1W2PQ73 354 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 LRP5LA4QPB2 252 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 TMEM247A6NEH6 219 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 OR6C65A6NJZ3 312 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 B9A039 149 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 SLCO1B7G3V0H7 640 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 hCG_2039718K7EN88 272 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 M0R082 166 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 CLIC1O00299 241 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 UBDO15205 165 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 SLC43A1O75387 559 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 PDE5AO76074 875 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 ZNF432O94892 652 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 IGKV3-15P01624 115 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 ZNF43P17038 809 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 CBLP22681 906 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 HTR2AP28223 471 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 THBS4P35443 961 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 SH3BGRP55822 239 aaPredicted RBP9.13□□□□□ -0.95
LSM4-205ENST00000597776 IL1RL1Q01638 556 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 NPRL3Q12980 569 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 C1DQ13901 141 aaKnown RBP9.13□□□□□ -0.95
LSM4-205ENST00000597776 RGNQ15493 299 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 EFNB3Q15768 340 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 ZSWIM7Q19AV6 140 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 MSANTD1Q6ZTZ1 278 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 SVOPLQ8N434 492 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 ZNF417Q8TAU3 575 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 GTF2H4Q92759 462 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 TAAR8Q969N4 342 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 ZNF317Q96PQ6 595 aaPredicted RBP9.13□□□□□ -0.95
LSM4-205ENST00000597776 ZNF587Q96SQ5 575 aaPredicted RBP9.13□□□□□ -0.95
LSM4-205ENST00000597776 ARMC7Q9H6L4 198 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 GPR35Q9HC97 309 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 A4GALTQ9NPC4 353 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 THUMPD1Q9NXG2 353 aaKnown RBP9.13□□□□□ -0.95
LSM4-205ENST00000597776 PRDM4Q9UKN5 801 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 RAB21Q9UL25 225 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 RCE1Q9Y256 329 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 IFT52Q9Y366 437 aa9.13□□□□□ -0.95
LSM4-205ENST00000597776 IGHV2OR16-5A0A0B4J2B6 119 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 A0A1B0GWA3 101 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 SH3PXD2BA1X283 911 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 TGFAP01135 160 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms