RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 MAGED1Q9Y5V3 778 aaPredicted RBP9.23□□□□□ -0.93
CCDC9-203ENST00000596938 ACANP16112 2415 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 BBIP1A8MTZ0 92 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 FAM171A2A8MVW0 826 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 RPL36A-HNRNPH2H7BZ11 118 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 KRT33AO76009 404 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF432O94892 652 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 CD8AP01732 235 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 HOXB1P14653 301 aaPredicted RBP9.22□□□□□ -0.93
CCDC9-203ENST00000596938 GTF2E2P29084 291 aaKnown RBP9.22□□□□□ -0.93
CCDC9-203ENST00000596938 GRPRP30550 384 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 PCGF2P35227 344 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 SELENOPP49908 381 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF83P51522 516 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 CDH12P55289 794 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 ATP5J2P56134 94 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 KLF10Q13118 480 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 NRF1Q16656 503 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 VMACQ2NL98 169 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 TRMT5Q32P41 509 aaKnown RBP9.22□□□□□ -0.93
CCDC9-203ENST00000596938 HSP90B2PQ58FF3 399 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 C9orf135Q5VTT2 229 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 CGB2Q6NT52 195 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 DTX2Q86UW9 622 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 CALHM3Q86XJ0 350 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 DEPDC4Q8N2C3 294 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 SCAIQ8N9R8 606 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 SMYD1Q8NB12 490 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 OR8J3Q8NGG0 315 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 OR10A6Q8NH74 314 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 MAGEE2Q8TD90 523 aaPredicted RBP9.22□□□□□ -0.93
CCDC9-203ENST00000596938 RASSF5Q8WWW0 418 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 LRRC58Q96CX6 371 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 Q96MF0 132 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 GSX1Q9H4S2 264 aaPredicted RBP9.22□□□□□ -0.93
CCDC9-203ENST00000596938 MED4Q9NPJ6 270 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 FAIMQ9NVQ4 179 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 B3GAT1Q9P2W7 334 aa9.22□□□□□ -0.93
CCDC9-203ENST00000596938 FLNAP21333 2647 aaKnown RBP9.22□□□□□ -0.93
CCDC9-203ENST00000596938 ROS1P08922 2347 aa9.21□□□□□ -0.93
CCDC9-203ENST00000596938 A0A1W2PR80 420 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF587BE7ETH6 402 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 MS4A18H0YCH9 400 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 M0R082 166 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 M0R1B8 84 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 SLC22A2O15244 555 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 UPK3AO75631 287 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 WNT11O96014 354 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 BGLAPP02818 100 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 CD247P20963 164 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 CLDN17P56750 224 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 GUCY1A3Q02108 690 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 LTBQ06643 244 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 C1DQ13901 141 aaKnown RBP9.21□□□□□ -0.94
CCDC9-203ENST00000596938 VEZF1Q14119 521 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 MAPRE2Q15555 327 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 ETFDHQ16134 617 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 MS4A18Q3C1V0 323 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 MMEL1Q495T6 779 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 AGAP6Q5VW22 663 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 NIPAL3Q6P499 406 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 ANKRD16Q6P6B7 361 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 SLC22A25Q6T423 547 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 NHLRC1Q6VVB1 395 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 CIARTQ8N365 385 aaPredicted RBP9.21□□□□□ -0.94
CCDC9-203ENST00000596938 FAM169BQ8N8A8 192 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 OR6T1Q8NGN1 323 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF417Q8TAU3 575 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 RNF217Q8TC41 542 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 BCL2L2Q92843 193 aaPredicted RBP9.21□□□□□ -0.94
CCDC9-203ENST00000596938 TAMM41Q96BW9 452 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 COX4I2Q96KJ9 171 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF587Q96SQ5 575 aaPredicted RBP9.21□□□□□ -0.94
CCDC9-203ENST00000596938 MCHR1Q99705 422 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 ECSITQ9BQ95 431 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 TRAF4Q9BUZ4 470 aaPredicted RBP9.21□□□□□ -0.94
CCDC9-203ENST00000596938 C1QTNF6Q9BXI9 259 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 PCDHAC1Q9H158 963 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 GID8Q9NWU2 228 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 MRPL39Q9NYK5 338 aaKnown RBP9.21□□□□□ -0.94
CCDC9-203ENST00000596938 SEC14L4Q9UDX3 406 aa9.21□□□□□ -0.94
CCDC9-203ENST00000596938 FREM1Q5H8C1 2179 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 ARPC4-TTLL3A0A0A6YYG9 625 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 LOC100653049A0A140TA62 436 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 E7EQL1 145 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 H7C1Q1 480 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 M0R3H8 397 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 FXYD1O00168 92 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 MRASO14807 208 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 ATP8B1O43520 1251 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 CHP2O43745 196 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 SLC43A1O75387 559 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 KRT34O76011 436 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 LYPD3O95274 346 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 MT-ATP6P00846 226 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 OPN1SWP03999 348 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 CDH2P19022 906 aaPredicted RBP9.2□□□□□ -0.94
CCDC9-203ENST00000596938 TTKP33981 857 aa9.2□□□□□ -0.94
CCDC9-203ENST00000596938 MDH1P40925 334 aaKnown RBP9.2□□□□□ -0.94
CCDC9-203ENST00000596938 CRYBA2P53672 197 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms