RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SELENONQ9NZV5 590 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 UPB1Q9UBR1 384 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 CORINQ9Y5Q5 1042 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 CCT8L1PA6NM43 557 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 MS4A18H0YCH9 400 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 M0R082 166 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 M0R3H8 397 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 AIM2O14862 343 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 CHP2O43745 196 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 SMPD2O60906 423 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 THY1P04216 161 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 CD99P14209 185 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 GRPRP30550 384 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 NKX6-1P78426 367 aaPredicted RBP11.46□□□□□ -0.57
USE1-207ENST00000596136 LTBQ06643 244 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 FOXD4Q12950 439 aaPredicted RBP11.46□□□□□ -0.57
USE1-207ENST00000596136 MS4A18Q3C1V0 323 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
USE1-207ENST00000596136 ALKBH2Q6NS38 261 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 TSPYL5Q86VY4 417 aaPredicted RBP11.46□□□□□ -0.57
USE1-207ENST00000596136 RBM45Q8IUH3 476 aaKnown RBP11.46□□□□□ -0.57
USE1-207ENST00000596136 KDM8Q8N371 416 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 SCAIQ8N9R8 606 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 ANKK1Q8NFD2 765 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 ZNF417Q8TAU3 575 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 AKAP1Q92667 903 aaKnown RBP eCLIP11.46□□□□□ -0.57
USE1-207ENST00000596136 ZNF587Q96SQ5 575 aaPredicted RBP11.46□□□□□ -0.57
USE1-207ENST00000596136 ZNF426Q9BUY5 554 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 GSX2Q9BZM3 304 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 LINC00470Q9BZP3 86 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 SLC17A5Q9NRA2 495 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 ZNF701Q9NV72 531 aaPredicted RBP11.46□□□□□ -0.57
USE1-207ENST00000596136 ARMCX1Q9P291 453 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 SEC14L4Q9UDX3 406 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 RCE1Q9Y256 329 aa11.46□□□□□ -0.57
USE1-207ENST00000596136 SHISA9B4DS77 424 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 RPL36A-HNRNPH2H7BZ11 118 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 CCDC22O60826 627 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 DANCRP0C864 163 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 FOSL1P15407 271 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 ZNF43P17038 809 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 PTAFRP25105 342 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 GTF2E2P29084 291 aaKnown RBP11.45□□□□□ -0.58
USE1-207ENST00000596136 SELENOPP49908 381 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 ENTPD8Q5MY95 495 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 C8orf82Q6P1X6 216 aaPredicted RBP11.45□□□□□ -0.58
USE1-207ENST00000596136 LINGO2Q7L985 606 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 ABHD12BQ7Z5M8 362 aaPredicted RBP11.45□□□□□ -0.58
USE1-207ENST00000596136 P3H2Q8IVL5 708 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 WFDC11Q8NEX6 87 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 ADAMTS16Q8TE57 1224 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 RCN3Q96D15 328 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 RADILQ96JH8 1075 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 MRPL39Q9NYK5 338 aaKnown RBP11.45□□□□□ -0.58
USE1-207ENST00000596136 USP22Q9UPT9 525 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 AP3M1Q9Y2T2 418 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 AMDHD2Q9Y303 409 aa11.45□□□□□ -0.58
USE1-207ENST00000596136 C2CD3Q4AC94 2353 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 TRAPPC13A5PLN9 417 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 FAM220BPB1ANY3 271 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 OVOL3O00110 214 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 ARHGEF9O43307 516 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 TRAF3IP2O43734 574 aaPredicted RBP11.44□□□□□ -0.58
USE1-207ENST00000596136 UPK3AO75631 287 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 MT-ATP6P00846 226 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 IFNA14P01570 189 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 COX4I1P13073 169 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 PAX7P23759 505 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 CLDN17P56750 224 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 SLC25A3Q00325 362 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 NIPAL3Q6P499 406 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 TMEM108Q6UXF1 575 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 WDR88Q6ZMY6 472 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 SLC15A3Q8IY34 581 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 POU5F2Q8N7G0 328 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 OR52N5Q8NH56 324 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 MAGEE2Q8TD90 523 aaPredicted RBP11.44□□□□□ -0.58
USE1-207ENST00000596136 SLC26A7Q8TE54 656 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 NEUROG1Q92886 237 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 FBXW5Q969U6 566 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 MPP4Q96JB8 637 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 MOGAT1Q96PD6 335 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 SLC19A3Q9BZV2 496 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 GRIP2Q9C0E4 1043 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 POLR2J2Q9GZM3 115 aaKnown RBP11.44□□□□□ -0.58
USE1-207ENST00000596136 POLR2J3Q9H1A7 115 aaKnown RBP11.44□□□□□ -0.58
USE1-207ENST00000596136 MYLK2Q9H1R3 596 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 CMTM6Q9NX76 183 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 BAG5Q9UL15 447 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 MGAT4BQ9UQ53 548 aa11.44□□□□□ -0.58
USE1-207ENST00000596136 CPSF4LA6NMK7 179 aaKnown RBP11.43□□□□□ -0.58
USE1-207ENST00000596136 ZNF587BE7ETH6 402 aa11.43□□□□□ -0.58
USE1-207ENST00000596136 PLPP3O14495 311 aa11.43□□□□□ -0.58
USE1-207ENST00000596136 ABCD4O14678 606 aa11.43□□□□□ -0.58
USE1-207ENST00000596136 CLOCKO15516 846 aa11.43□□□□□ -0.58
USE1-207ENST00000596136 HPRP00739 348 aa11.43□□□□□ -0.58
USE1-207ENST00000596136 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
USE1-207ENST00000596136 CD40P25942 277 aa11.43□□□□□ -0.58
USE1-207ENST00000596136 KDELR2P33947 212 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms