RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ZNF433Q8N7K0 673 aaPredicted RBP9.83□□□□□ -0.84
VRK3-210ENST00000596121 CCDC197Q8NCU1 140 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 OR6S1Q8NH40 331 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 TMEM255BQ8WV15 326 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 PLEKHF2Q9H8W4 249 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 MAN2C1Q9NTJ4 1040 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 ADA2Q9NZK5 511 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 SELENONQ9NZV5 590 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 RHCGQ9UBD6 479 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 RASD1Q9Y272 281 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 CADP27708 2225 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 ANKRD17O75179 2603 aaKnown RBP9.82□□□□□ -0.84
VRK3-210ENST00000596121 LOC102725191A0A1B0GVB3 256 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 KPNA4O00629 521 aaPredicted RBP9.82□□□□□ -0.84
VRK3-210ENST00000596121 PLPP3O14495 311 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 CASKO14936 926 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 TRAF3IP2O43734 574 aaPredicted RBP9.82□□□□□ -0.84
VRK3-210ENST00000596121 UPK3AO75631 287 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 ZNF432O94892 652 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 PRSS23O95084 383 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 VAMP5O95183 116 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 OR5F1O95221 314 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 ZNF682O95780 498 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 CH25HO95992 272 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 HSD17B1P14061 328 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 PPP3CBP16298 524 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 TCN1P20061 433 aaPredicted RBP9.82□□□□□ -0.84
VRK3-210ENST00000596121 FAPQ12884 760 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 ZNF74Q16587 644 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 IQCCQ4KMZ1 466 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 C9orf135Q5VTT2 229 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 GLYATQ6IB77 296 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 ALKBH2Q6NS38 261 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 C5orf46Q6UWT4 87 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 CASP12Q6UXS9 341 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 RINLQ6ZS11 566 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 AAED1Q7RTV5 226 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 SLC46A3Q7Z3Q1 461 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 WFDC8Q8IUA0 241 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 DEFB107AQ8IZN7 70 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 UBE2J2Q8N2K1 259 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 STEAP2Q8NFT2 490 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 PFN4Q8NHR9 129 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 KISS1RQ969F8 398 aaPredicted RBP9.82□□□□□ -0.84
VRK3-210ENST00000596121 NSL1Q96IY1 281 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 TXNDC15Q96J42 360 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 HSH2DQ96JZ2 352 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 OXGR1Q96P68 337 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 HDHD5Q9BXW7 423 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 OR10A4Q9H209 315 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 C20orf141Q9NUB4 165 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 MALT1Q9UDY8 824 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 B3GALT5Q9Y2C3 310 aa9.82□□□□□ -0.84
VRK3-210ENST00000596121 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.81□□□□□ -0.84
VRK3-210ENST00000596121 B2RBV5 119 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 NDUFAB1O14561 156 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 PIP5K1CO60331 668 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 CNOT4O95628 575 aaKnown RBP9.81□□□□□ -0.84
VRK3-210ENST00000596121 PLAUP00749 431 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 DNAJA1P31689 397 aaKnown RBP9.81□□□□□ -0.84
VRK3-210ENST00000596121 CLDN17P56750 224 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 TAS2R41P59536 307 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 PMS2P3Q13401 168 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 GABRA6Q16445 453 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 IFI44LQ53G44 452 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 PHYHD1Q5SRE7 291 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 TTC33Q6PID6 262 aaPredicted RBP9.81□□□□□ -0.84
VRK3-210ENST00000596121 C10orf53Q8N6V4 93 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 SCAIQ8N9R8 606 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 WDR31Q8NA23 367 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 ADPRHL1Q8NDY3 354 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 FAM162AQ96A26 154 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 PIK3IP1Q96FE7 263 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 MPP4Q96JB8 637 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 C7orf34Q96L11 122 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 EPYCQ99645 322 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 DCAF13Q9NV06 445 aaKnown RBP9.81□□□□□ -0.84
VRK3-210ENST00000596121 PARPBPQ9NWS1 579 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 MRPL39Q9NYK5 338 aaKnown RBP9.81□□□□□ -0.84
VRK3-210ENST00000596121 TAS2R5Q9NYW4 299 aa9.81□□□□□ -0.84
VRK3-210ENST00000596121 A0A1W2PR80 420 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 ENO4A6NNW6 628 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 RAD51DO75771 328 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 MT-ATP6P00846 226 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 MT-ND1P03886 318 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 ASAH2BP0C7U1 165 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 THRBP10828 461 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 ZNF43P17038 809 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 FUT1P19526 365 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 IL32P24001 234 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 GTF2E2P29084 291 aaKnown RBP9.8□□□□□ -0.84
VRK3-210ENST00000596121 NIPAL3Q6P499 406 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 TBPL2Q6SJ96 375 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 CDH24Q86UP0 819 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 MEX3DQ86XN8 651 aaKnown RBP9.8□□□□□ -0.84
VRK3-210ENST00000596121 TMEM123Q8N131 208 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 OR5J2Q8NH18 312 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 TMEM239Q8WW34 195 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 LZICQ8WZA0 190 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 HSD17B8Q92506 261 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms