RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 WDFY1Q8IWB7 410 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 UBE2J2Q8N2K1 259 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 ADPRHL1Q8NDY3 354 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 OR6S1Q8NH40 331 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 HSD17B8Q92506 261 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 PROX1Q92786 737 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 CMTM5Q96DZ9 223 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 PLPPR2Q96GM1 343 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 TMEM204Q9BSN7 226 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 AMBRA1Q9C0C7 1298 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 SLCO5A1Q9H2Y9 848 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 ALG2Q9H553 416 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 PARPBPQ9NWS1 579 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 ASB6Q9NWX5 421 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 FAM53CQ9NYF3 392 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 NPAP1Q9NZP6 1156 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 SELENONQ9NZV5 590 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 BAG5Q9UL15 447 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 ARL2BPQ9Y2Y0 163 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 LOC102725191A0A1B0GVB3 256 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 OR5H1A6NKK0 313 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 ENO4A6NNW6 628 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 MS4A18H0YCH9 400 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 RAF1P04049 648 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 HLA-DOBP13765 273 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 CD53P19397 219 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 GGT1P19440 569 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 FUT4P22083 530 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 GTF2E2P29084 291 aaKnown RBP9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC25A3Q00325 362 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 PIN1Q13526 163 aaPredicted RBP9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 STK11Q15831 433 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 GABRA6Q16445 453 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 MS4A18Q3C1V0 323 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 TIMM23BQ5SRD1 257 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 NCMAPQ5T1S8 102 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 C9orf135Q5VTT2 229 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 ALKBH2Q6NS38 261 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 DEF8Q6ZN54 512 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 H1FNTQ75WM6 255 aaPredicted RBP9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 VTCN1Q7Z7D3 282 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 MUS81Q96NY9 551 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 OXGR1Q96P68 337 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 EPYCQ99645 322 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 CXXC4Q9H2H0 198 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 MEPEQ9NQ76 525 aaPredicted RBP9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 ARL8BQ9NVJ2 186 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 TAS2R16Q9NYV7 291 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 B3GALT5Q9Y2C3 310 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 AP3M1Q9Y2T2 418 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 SNX13Q9Y5W8 968 aa9.66□□□□□ -0.86
SHKBP1-206ENST00000595523 A0A1W2PR80 420 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 DPRXA6NFQ7 191 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 CXCR6O00574 342 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 KPNA4O00629 521 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 PLPP3O14495 311 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 UPK3AO75631 287 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 IFNA14P01570 189 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 NCK1P16333 377 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 DNASE1P24855 282 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 ART1P52961 327 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 UGT2B15P54855 530 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 NR1H2P55055 460 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 CLDN17P56750 224 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 SELENOWP63302 87 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 MFSD13AQ14CX5 517 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 PPA1Q15181 289 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF74Q16587 644 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 NIPAL3Q6P499 406 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF704Q6ZNC4 412 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC46A3Q7Z3Q1 461 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 NKAIN4Q8IVV8 208 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 TMEM123Q8N131 208 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 LRRC17Q8N6Y2 441 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 ANKS4BQ8N8V4 417 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 SCAIQ8N9R8 606 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 WDR31Q8NA23 367 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 LILRB1Q8NHL6 650 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 IGFBPL1Q8WX77 278 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 MBD6Q96DN6 1003 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 TPD52L3Q96J77 140 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 MPP4Q96JB8 637 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 ALKBH3Q96Q83 286 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 CCT8L2Q96SF2 557 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 FOXC2Q99958 501 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 USB1Q9BQ65 265 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 MRPL39Q9NYK5 338 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 UPB1Q9UBR1 384 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 A4GNTQ9UNA3 340 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 RCE1Q9Y256 329 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 CORINQ9Y5Q5 1042 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC25A15Q9Y619 301 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 RTTNQ86VV8 2226 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 TLN2Q9Y4G6 2542 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 ARFGEF3Q5TH69 2177 aa9.65□□□□□ -0.86
SHKBP1-206ENST00000595523 NF1P21359 2839 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 CIB4A0PJX0 185 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 FFAR1O14842 300 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 OR5F1O95221 314 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 CH25HO95992 272 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms