RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 Q9N2J8 555 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 POLE3Q9NRF9 147 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 EPHA6Q9UF33 1036 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 CACNA1IQ9P0X4 2223 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 CFAP54Q96N23 3096 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 MPTX1A8MV57 137 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 PRODHO43272 600 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 ZNF749O43361 778 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 LANCL1O43813 399 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 DRD5P21918 477 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 CALCRP30988 508 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 GCGRP47871 477 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 POLR2GP62487 172 aaKnown RBP eCLIP15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 GSG1Q2KHT4 349 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 MINDY4Q4G0A6 757 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 FAM198BQ6UWH4 519 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 MRGPREQ86SM8 312 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 BVESQ8NE79 360 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 OR5M3Q8NGP4 307 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 YIPF5Q969M3 257 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 ACTR6Q9GZN1 396 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 ENAMQ9NRM1 1142 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 PNO1Q9NRX1 252 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 PPIEQ9UNP9 301 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 MRPS7Q9Y2R9 242 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 BLACEA4D250 179 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 FITM1A5D6W6 292 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 UNC119BA6NIH7 251 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 C17orf105B2RV13 164 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 G3V3Q6 166 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 H0YIG0 161 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 DNASE2O00115 360 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 AIPO00170 330 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 SURF4O15260 269 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 NUPL2O15504 423 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 NUDT21O43809 227 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 LYPD3O95274 346 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 HLA-DPB1P04440 258 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 NMBP08949 121 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 CT45A8P0DMV1 189 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 CT45A9P0DMV2 189 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 RBMS1P29558 406 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 HSD11B2P80365 405 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 CT45A2Q5DJT8 189 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 KANSL1Q7Z3B3 1105 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 ARIH2OSQ8N7S6 290 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 OR2T33Q8NG76 320 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 OR2T35Q8NGX2 323 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 SFXN2Q96NB2 322 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 C12orf57Q99622 126 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 RAB33BQ9H082 229 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 RNF32Q9H0A6 362 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 TMEM27Q9HBJ8 222 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 SIDT1Q9NXL6 827 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 CBLCQ9ULV8 474 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 KCNK7Q9Y2U2 307 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 EXOSC1Q9Y3B2 195 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 CEP192Q8TEP8 1941 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 WDFY4Q6ZS81 3184 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 OR6C65A6NJZ3 312 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 DUX1O43812 170 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 CSF2RBP32927 897 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 MTNR1AP48039 350 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 PGGHGQ32M88 737 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 NDUFAF6Q330K2 333 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 SMARCD3Q6STE5 483 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 NEIL3Q8TAT5 605 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 PMM1Q92871 262 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 CD180Q99467 661 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 ARHGAP9Q9BRR9 750 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 TEX12Q9BXU0 123 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 ENKD1Q9H0I2 346 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 DNAJB12Q9NXW2 375 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 FLRT3Q9NZU0 649 aa15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 ZNF223Q9UK11 482 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-205ENST00000594973 F8W036 122 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 GNB5O14775 395 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 FMO6PO60774 539 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 HRGP04196 525 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 ZGLP1P0C6A0 271 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 SAGP10523 405 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 FOLR1P15328 257 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 GALP22466 123 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 RAB40BQ12829 278 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 ST3GAL2Q16842 350 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 KRT74Q7RTS7 529 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 PLXDC1Q8IUK5 500 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 ZNF321PQ8N8H1 164 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 BBS1Q8NFJ9 593 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 OR1L3Q8NH93 324 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 BPIFA2Q96DR5 249 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 LMF1Q96S06 567 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 ZNF559Q9BR84 538 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 DUSP15Q9H1R2 295 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 OR52D1Q9H346 318 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 UBQLN3Q9H347 655 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 ING1Q9UK53 422 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 A0A1B0GWA3 101 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 A0A1W2PPC1 479 aa15.61■□□□□ 0.09
SHKBP1-205ENST00000594973 FAM183AA6NL82 134 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms